Gene EcolC_1970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1970 
Symbol 
ID6068223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2176893 
End bp2177825 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID641601384 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001724943 
Protein GI170019989 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000977256 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGTCAG AATATTCACT CGAAGTTGTT GATGCGGTAG CGCGTAATGG TAGTTTTAGC 
GCTGCGGCAC AGGAGCTGCA TCGCGTTCCT TCTGCGGTCA GCTATACCGT GCGTCAGCTG
GAAGAGTGGC TGGCGGTGCC GCTCTTTGAA AGACGGCACC GTGATGTGGA ACTGACCGCT
GCCGGAGCGT GGTTTCTCAA AGAAGGGCGC TCTGTTGTCA AAAAAATGCA GATCACCCGC
CAGCAATGTC AGCAGATAGC GAACGGCTGG CGCGGTCAGT TAGCTATCGC AGTGGATAAT
ATTGTCAGGC CAGAACGTAC ACGGCAGATG ATCGTTGATT TTTATCGCCA TTTTGACGAC
GTCGAACTTC TGGTCTTTCA GGAAGTGTTT AACGGTGTCT GGGATGCGCT TTCCGATGGG
CGCGTGGAAC TGGCGATTGG CGCAACACGC GCGATTCCGG TAGGCGGTCG TTATGCCTTC
CGGGATATGG GGATGCTAAG CTGGAGTTGC GTTGTTGCCA GCCACCACCC GCTGGCGTTG
ATGGATGGCC CGTTCAGCGA TGATACGTTG CGCAACTGGC CGTCGTTGGT GCGCGAAGAC
ACCTCGCGAA CGCTACCTAA ACGTATTACT TGGTTGCTGG ATAACCAAAA AAGAGTTGTC
GTGCCTGACT GGGAATCATC GGCAACCTGT ATCTCGGCAG GATTATGCAT AGGGATGGTG
CCAACACATT TCGCCAAACC GTGGCTTAAT GAGGGGAAGT GGGTGGCATT AGAACTGGAA
AACCCCTTTC CGGATTCGGC ATGTTGTCTG ACATGGCAGC AAAATGATAT GTCGCCTGCG
TTAACCTGGC TGCTTGAGTA TCTCGGCGAT AGTGAGACGC TGAATAAGGA GTGGCTGCGG
GAGCCGGAAG AGACTCCCGC AACGGGTGAT TAA
 
Protein sequence
MWSEYSLEVV DAVARNGSFS AAAQELHRVP SAVSYTVRQL EEWLAVPLFE RRHRDVELTA 
AGAWFLKEGR SVVKKMQITR QQCQQIANGW RGQLAIAVDN IVRPERTRQM IVDFYRHFDD
VELLVFQEVF NGVWDALSDG RVELAIGATR AIPVGGRYAF RDMGMLSWSC VVASHHPLAL
MDGPFSDDTL RNWPSLVRED TSRTLPKRIT WLLDNQKRVV VPDWESSATC ISAGLCIGMV
PTHFAKPWLN EGKWVALELE NPFPDSACCL TWQQNDMSPA LTWLLEYLGD SETLNKEWLR
EPEETPATGD