Gene EcolC_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1923 
Symbol 
ID6068683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp2123958 
End bp2124422 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID641601334 
ProductNLP/P60 protein 
Protein accessionYP_001724896 
Protein GI170019942 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.468553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCT GCCTTATTTT GATCACAGCA CTGCTTCTGG CCGGGTGTAG CCACCATAAA 
GCACCGCCGC CAAATGCCAG ACTTTCTGAT TCGATTACCG TTATTGCCGG TTTGAACGAC
CAGCTACAAA GCTGGCATGG CACGCCGTAT CGTTATGGTG GCATGACGCG GCGCGGTGTG
GACTGTTCGG GATTTGTGGT TGTGACGATG CGCGATCGTT TCGATTTGCA GCTGCCCCGT
GAAACCAAAC AACAAGCCTC TATTGGCACG CAAATTGATA AAGACGAGTT GCTGCCAGGT
GACCTGGTCT TTTTCAAAAC GGGGTCCGGA CAAAATGGTT TGCATGTAGG TATTTACGAT
ACCAACAACC AATTTATCCA CGCCTCTACC AGCAAGGGAG TGATGCGTTC CTCACTTGAT
AATGTCTATT GGCAGAAAAA TTTCTGGCAG GCGAGACGAA TCTAG
 
Protein sequence
MRFCLILITA LLLAGCSHHK APPPNARLSD SITVIAGLND QLQSWHGTPY RYGGMTRRGV 
DCSGFVVVTM RDRFDLQLPR ETKQQASIGT QIDKDELLPG DLVFFKTGSG QNGLHVGIYD
TNNQFIHAST SKGVMRSSLD NVYWQKNFWQ ARRI