Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1829 |
Symbol | |
ID | 6064477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 2028710 |
End bp | 2029825 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641601243 |
Product | ribonuclease D |
Protein accession | YP_001724805 |
Protein GI | 170019851 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.299724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTACCA CGGACGATGC GCTGGCTTCT TTGTGTGAAG CCGTCCGTGC CTTTCCGGCG ATAGCCCTGG ATACTGAATT TGTTCGTACG CGCACTTATT ACCCGCAGCT GGGGTTGATT CAACTTTTCG ATGGCGAGCA TCTGGCGCTA ATCGATCCAC TCGGGATCAC CGACTGGTCA CCGCTGAAAG CGATCCTGCG CGATCCGTCC ATCACAAAAT TTCTCCATGC AGGCAGTGAA GATCTGGAAG TGTTCCTCAA TGTCTTTGGC GAATTACCAC AACCCTTGAT TGACACGCAA ATCCTTGCTG CCTTCTGCGG ACGCCCGATG TCATGGGGTT TCGCTTCCAT GGTGGAAGAG TATTCCGGCG TTACGCTGGA CAAGAGTGAA TCGCGCACCG ACTGGCTGGC CAGACCGCTG ACCGAACGTC AGTGTGAATA CGCAGCGGCG GATGTCTGGT ATCTGTTACC GATCACCGCC AAGCTTATGG TAGAAACGGA GGCCTCCGGC TGGCTACCTG CGGCGCTGGA TGAATGCCGC CTGATGCAAA TGCGTCGTCA GGAAGTCGTT GCGCCGGAAG ATGCCTGGCG TGATATCACC AATGCCTGGC AATTACGCAC ACGCCAACTG GCCTGTCTGC AACTGTTAGC CGACTGGCGA CTGCGCAAGG CGCGAGAGCG CGATCTGGCG GTGAACTTTG TCGTGCGTGA AGAGCATTTG TGGTCGGTAG CGCGTTATAT GCCGGGAAGT TTAGGCGAAC TGGACAGCCT GGGTTTATCC GGTAGCGAAA TCCGCTTTCA CGGTAAAACG CTGCTAGCGC TGGTGGAAAA AGCGCAGACA TTGCCGGAAG ATGCCTTACC GCAGCCGATG CTTAACCTGA TGGACATGCC GGGTTATCGT AAAGCGTTTA AAGCGATTAA GTCGCTGATT ACTGACGTGA GCGAAACGCA TAAGATCAGC GCCGAATTGC TGGCATCGCG TCGGCAAATC AACCAACTGC TGAACTGGCA CTGGAAACTG AAACCGCAGA ACAATTTGCC GGAGCTGATT TCCGGCTGGC GTGGTGAGCT GATGGCGGAA GCATTACACA ATTTATTGCA GGAATATCCG CAGTAA
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Protein sequence | MITTDDALAS LCEAVRAFPA IALDTEFVRT RTYYPQLGLI QLFDGEHLAL IDPLGITDWS PLKAILRDPS ITKFLHAGSE DLEVFLNVFG ELPQPLIDTQ ILAAFCGRPM SWGFASMVEE YSGVTLDKSE SRTDWLARPL TERQCEYAAA DVWYLLPITA KLMVETEASG WLPAALDECR LMQMRRQEVV APEDAWRDIT NAWQLRTRQL ACLQLLADWR LRKARERDLA VNFVVREEHL WSVARYMPGS LGELDSLGLS GSEIRFHGKT LLALVEKAQT LPEDALPQPM LNLMDMPGYR KAFKAIKSLI TDVSETHKIS AELLASRRQI NQLLNWHWKL KPQNNLPELI SGWRGELMAE ALHNLLQEYP Q
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