Gene EcolC_1769 details

Gene Information

• Locus tag: EcolC_1769
• Symbol: ruvC
• ID: 6065418
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli ATCC 8739
• Kingdom: Bacteria
• Replicon accession: NC_010468
• Strand: +
• Start bp: 1968538
• End bp: 1969059
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641601184
• Product: Holliday junction resolvase
• Protein accession: YP_001724746
• Protein GI: 170019792
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0125353
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTATTA TTCTCGGCAT TGATCCGGGT TCGCGCGTGA CCGGCTACGG CGTCATCCGC 
CAGGTAGGTA GGCAACTGTC CTACCTGGGT AGCGGATGCA TACGCACCAA AGTGGATGAT 
TTACCGTCTC GTCTGAAACT CATCTATGCG GGCGTGACGG AAATCATCAC CCAGTTCCAG 
CCTGATTATT TCGCCATTGA ACAAGTCTTT ATGGCAAAGA ACGCTGACTC AGCCCTGAAA 
CTGGGCCAGG CGCGCGGCGT GGCGATTGTG GCGGCGGTGA ATCAGGAGTT GCCAGTATTT 
GAATACGCGG CACGTCAGGT AAAGCAAACG GTGGTAGGTA TTGGTAGTGC CGAAAAAAGC 
CAGGTGCAGC ATATGGTCCG CACCTTGCTG AAACTGCCCG CTAATCCACA GGCGGATGCC 
GCCGATGCGC TGGCGATTGC CATCACCCAC TGCCACGTTA GTCAGAATGC GATGCAGATG 
AGCGAATCGC GGCTGAACCT GGCGAGAGGG CGACTGCGTT AA 

 

Protein sequence

MAIILGIDPG SRVTGYGVIR QVGRQLSYLG SGCIRTKVDD LPSRLKLIYA GVTEIITQFQ 
PDYFAIEQVF MAKNADSALK LGQARGVAIV AAVNQELPVF EYAARQVKQT VVGIGSAEKS 
QVQHMVRTLL KLPANPQADA ADALAIAITH CHVSQNAMQM SESRLNLARG RLR