Gene EcolC_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1739 
Symbol 
ID6068740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1936509 
End bp1936937 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content45% 
IMG OID641601154 
Productuniversal stress protein UspC 
Protein accessionYP_001724716 
Protein GI170019762 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.342522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTATA GCAATATTCT TGTCGCTGTT GCGGTTACAC CGGAAAGTCA GCAACTGCTG 
GCAAAAGCGG TATCTATCGC CAGGCCAGTA AAGGGACACA TCAGTTTAAT TACTCTCGCT
TCCGACCCGG AAATGTACAA TCAATTAGCT GCGCCGATGC TTGAAGATTT ACGCAGCGTG
ATGCAGGAAG AAACGCAAAG CTTTCTTGAT AAGTTAATTC AGGATGCGGG GTATCCCGTT
GACAAGACGT TTATTGCCTA CGGTGAGTTA AGCGAACATA TTCTGGAAGT ATGTCACAAG
CATCATTTCG ATTTGGTGAT TTGCGGTAAT CACAATCACA GTTTCTTTTC GCGAGCATCC
TGCTCGGCGA AAAGAGTTAT TGCCTCAAGT GAGGTCGATG TGCTGTTAGT TCCACTTACG
GGAGATTAA
 
Protein sequence
MSYSNILVAV AVTPESQQLL AKAVSIARPV KGHISLITLA SDPEMYNQLA APMLEDLRSV 
MQEETQSFLD KLIQDAGYPV DKTFIAYGEL SEHILEVCHK HHFDLVICGN HNHSFFSRAS
CSAKRVIASS EVDVLLVPLT GD