Gene EcolC_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1722 
Symbol 
ID6067496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1918877 
End bp1919629 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content54% 
IMG OID641601134 
Productputative amino-acid ABC transporter ATP-binding protein YecC 
Protein accessionYP_001724699 
Protein GI170019745 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1126] ABC-type polar amino acid transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.606951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.807623 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCA TTGAAGTTAA GAACCTGGTG AAAAAATTTC ACGGTCAGAC GGTGCTGCAC 
GGTATCGACC TTGAGGTAAA GCCTGGCGAA GTGGTGGCAA TTATCGGTCC GAGTGGTTCC
GGCAAAACCA CGTTGCTACG CAGCATAAAT CTGCTGGAAC AACCGGAAGC GGGAACTATC
ACCGTTGGCG ATATCACTAT TGATACTGCA CGTTCATTAA GTCAGCAAAA ATCGCTGATT
CGCCAGTTGC GTCAGCACGT CGGGTTTGTC TTCCAGAACT TTAATTTGTT TCCGCATCGT
ACGGTGCTGG AAAACATTAT TGAAGGGCCG GTGATCGTCA AAGGCGAACC GAAAGAAGAG
GCCACGGCGC GCGCTCGCGA GCTGTTGGCG AAAGTTGGGC TGGCCGGTAA AGAAACCAGC
TATCCACGTC GTTTGTCTGG CGGTCAACAG CAACGTGTTG CGATTGCACG TGCGCTGGCA
ATGCGTCCTG AGGTGATTTT GTTTGACGAG CCAACGTCGG CGCTGGATCC AGAGCTGGTG
GGCGAAGTCC TGAACACCAT CCGTCAGCTG GCGCAGGAAA AGCGCACGAT GGTGATTGTG
ACGCACGAAA TGAGCTTTGC CCGGGATGTT GCGGACCGGG CGATTTTTAT GGACCAGGGG
CGGATAGTCG AGCAGGGGGC AGCAAAAGCG TTATTTGCCG ATCCCCAGCA GCCTCGCACC
CGCCAGTTCC TCGAGAAGTT TCTGCTGCAA TAA
 
Protein sequence
MSAIEVKNLV KKFHGQTVLH GIDLEVKPGE VVAIIGPSGS GKTTLLRSIN LLEQPEAGTI 
TVGDITIDTA RSLSQQKSLI RQLRQHVGFV FQNFNLFPHR TVLENIIEGP VIVKGEPKEE
ATARARELLA KVGLAGKETS YPRRLSGGQQ QRVAIARALA MRPEVILFDE PTSALDPELV
GEVLNTIRQL AQEKRTMVIV THEMSFARDV ADRAIFMDQG RIVEQGAAKA LFADPQQPRT
RQFLEKFLLQ