Gene EcolC_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1719 
Symbol 
ID6065148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1916249 
End bp1917106 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID641601131 
Productcystine transporter subunit 
Protein accessionYP_001724696 
Protein GI170019742 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.470206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTACAA ACAATGGCTC TACACTGCAA ACAGACATAA CAACATTCGG GGTGAATATG 
AAATTAGCAC ATCTGGGACG TCAGGCATTG ATGGGTGTGA TGGCCGTGGC GCTGGTTGCG
GGCATGAGCG TTAAAAGTTT TGCAGATGAA GGTCTGCTTA ATAAAGTTAA AGAGCGCGGC
ACGCTGCTGG TAGGGCTGGA AGGAACTTAT CCGCCGTTCA GTTTTCAGGG AGATGACGGC
AAATTAACCG GTTTTGAAGT GGAATTTGCC CAACAGCTGG CAAAACATCT TGGCGTTGAG
GCGTCACTAA AACCGACCAA ATGGGACGGT ATGCTGGCGT CGCTGGACTC TAAACGCATT
GATGTGGTGA TTAATCAGGT CACCATTTCT GACGAGCGCA AGAAAAAATA CGATTTCTCT
ACCCCTTACA CCATTTCCGG TATTCAGGCG CTGGTGAAAA AAGGTAACGA AGGCACCATT
AAAACAGCTG CTGATCTGAA AGGCAAAAAA GTGGGTGTCG GCCTGGGCAC CAACTATGAA
GAGTGGCTGC GTCAGAATGT TCAGGGCGTC GATGTGCGTA CCTATGATGA TGACCCGACC
AAATATCAGG ATCTGCGCGT AGGCCGTATC GATGCGATCC TCGTTGACCG TCTGGCGGCG
CTGGATCTGG TGAAGAAAAC CAACGATACG CTGGCAGTAA CCGGTGAAGC ATTCTCCCGT
CAGGAGTCTG GCGTGGCGCT GCGTAAAGGA AATGAAGACC TGCTGAAAGC AGTGAATGAT
GCAATTGCGG AAATGCAAAA AGATGGCACT CTGCAAGCCC TTTCCGAAAA ATGGTTTGGT
GCTGATGTGA CCAAATAA
 
Protein sequence
MFTNNGSTLQ TDITTFGVNM KLAHLGRQAL MGVMAVALVA GMSVKSFADE GLLNKVKERG 
TLLVGLEGTY PPFSFQGDDG KLTGFEVEFA QQLAKHLGVE ASLKPTKWDG MLASLDSKRI
DVVINQVTIS DERKKKYDFS TPYTISGIQA LVKKGNEGTI KTAADLKGKK VGVGLGTNYE
EWLRQNVQGV DVRTYDDDPT KYQDLRVGRI DAILVDRLAA LDLVKKTNDT LAVTGEAFSR
QESGVALRKG NEDLLKAVND AIAEMQKDGT LQALSEKWFG ADVTK