Gene EcolC_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1676 
Symbol 
ID6065461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1878235 
End bp1879017 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content43% 
IMG OID641601090 
Producttranscriptional regulatory protein YedW 
Protein accessionYP_001724655 
Protein GI170019701 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000350308 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.20506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTTG AGGATAGCGA AAAAGCGGCC AGGGTAACCT TACAGCAGCA TTACAATTTT 
GTAATGAACC AGGCTGTTTC TATAACATAT GATTTATGGC ATATTATTTT CATGAAGATT
TTACTTATTG AAGATAATCA AAGGACCCAG GAGTGGGTAA CGCAGGGGCT TTCCGAAGCG
GGTTATGTCA TTGATGCCGT TTCTGATGGC AGAGATGGGC TTTATCTTGC GCTGAAGGAT
GATTATGCAT TGATCATTCT GGATATTATG CTTCCGGGTA TGGATGGCTG GCAGATCTTA
CAAACGTTAA GAACAGCAAA GCAAACCCCT GTTATTTGCC TTACTGCAAG GGATTCTGTC
GATGACAGAG TCAGAGGGCT GGACAGTGGA GCAAATGATT ATCTGGTAAA ACCTTTTTCA
TTTTCTGAGT TGCTGGCAAG GGTTCGGGCA CAATTAAGGC AACATCACGC TTTGAATTCA
ACATTAGAAA TCAGTGGCTT AAGAATGGAC TCTGTAAGTC AAAGTGTGAG CAGGGACAAT
ATCAGTATTA CACTGACGCG CAAGGAGTTT CAGTTACTTT GGCTACTGGC CTCCAGAGCT
GGCGAAATTA TACCCAGAAC GGTTATTGCG AGTGAAATTT GGGGAATCAA CTTTGATAGT
GATACCAATA CGGTGGATGT CGCCATTCGC AGGCTCCGCG CAAAAGTTGA TGATCCTTTT
CCTGAAAAGC TAATCGCCAC AATCCGGGGG ATGGGCTATT CATTCGTAGC GGTAAAAAAA
TAA
 
Protein sequence
MSFEDSEKAA RVTLQQHYNF VMNQAVSITY DLWHIIFMKI LLIEDNQRTQ EWVTQGLSEA 
GYVIDAVSDG RDGLYLALKD DYALIILDIM LPGMDGWQIL QTLRTAKQTP VICLTARDSV
DDRVRGLDSG ANDYLVKPFS FSELLARVRA QLRQHHALNS TLEISGLRMD SVSQSVSRDN
ISITLTRKEF QLLWLLASRA GEIIPRTVIA SEIWGINFDS DTNTVDVAIR RLRAKVDDPF
PEKLIATIRG MGYSFVAVKK