Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1642 |
Symbol | |
ID | 6064683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1821691 |
End bp | 1823061 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641601056 |
Product | PTS system galactitol-specific IIC component |
Protein accession | YP_001724626 |
Protein GI | 170019672 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000536368 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAACTGA TCACGCAATT TATAAACGAT CTGGGAAATT TTATATTTAT CCCGGTCATC TTTCTGGTAC TGATGAAGAT ACTTGGCCGT CCTCTTTCAG AATGTATCTC ATCTGCCATC AAAGTCGGCA TTGGTTTCAT TGCGTTAACC ATGACCATCA AACTGATGCT GGAAAAAATG CAACCGGCAG TCACCGGATT AGCAGAAGCA ACAGGTTCCT CGCTCAGTGC CATCGATGTT GGTGGCGCAG CGACTGCGGT TATGGGATTT GGCTCCAGCA TGGGCGCTAT CATTATTCCC CTCTGTGTTG CGGTAAATAT TGCAATGCTG GTCGCCCGCC TGACTGACTG TGTTAACGTT GATGTTTTCA ACCTTCATCA AAATGCGTCA ATGGGGGCAA TTGTTGGCGT CTATTCTGGT AGCTTCCTGT ATGGCGCATT GACCGCCGCG CTATTCCATG TATGGGCGCT GATCGCTGCC GATCTTGGTG CTAAAAATAA CGAAAAATTC TTTAACCTGC CAAAAGGTGT TGCGATCTCT CACCCGGTTG CCAATACCTA CTTACTTTTC GCTTATCCAT TCAACTGGAT TTATGATCGC ATCCCAGGCT TCCGTAATCT GAATGTGACC GCCGAAACTA TTCAAAAACG GTTTGGCATT CTCGGCGATC CAACTATGGT TGGTTTTATT ATTGGTATTT TGTTGGGCTT TTGTGGTTAT GGCTGGAAAT CCCCATACCA CACCATAATC GCCAGCCTAC AGTTAGGGAT GTATCTTGCT GCAGTCATGC TTCTGTTGCC ACGTATGACC TCTATCATGA TGGAAGGGCT TGTTCCGCTT TCCAACGTAG CACGCAAAAA ACTGGTCAAA CGTTTCCCGG ATCGTCAAAT CACTGTTGGT ATGGACACTG CTCTGATTGT GGGCCATCCA TCAGTTATCG CCCCTGCATT ATTGCTGATC CCGGTGATTG TGATCCTCGC CGTGATCTTG CCCGGCAACC GCGTTATGCC ACTGGGTGAT CTCTCTCAGT TTGTGTTTTT CATTGCCTGC ATGGTACCTG TTTTCAATGG CAACATTATT CGCACCTGGG TGACCTCGAT CATTTTGTTT GGTGGTGGTT TGTATATTGC ATCATGGATG GCACCGGCTA CCAACGAAGT CTTCCAGAAG TTTGGTACAA ACCCGGATGC CAGCGTGATG TACTCTTCGC TTAACCCGTC AGCGAATCCA TTTACTGGTC TGTTTGCCGC CCTGAGCCAT GTTGGAATCA TTGGCTATGT GATGGCAGGT ATCCTTTTGT TATCTATTGG ATACTTAATT AAACAAAAAT CACGTCGCCA GATTGAAACG GATTTGGAAA AAGCGCTTTA A
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Protein sequence | MELITQFIND LGNFIFIPVI FLVLMKILGR PLSECISSAI KVGIGFIALT MTIKLMLEKM QPAVTGLAEA TGSSLSAIDV GGAATAVMGF GSSMGAIIIP LCVAVNIAML VARLTDCVNV DVFNLHQNAS MGAIVGVYSG SFLYGALTAA LFHVWALIAA DLGAKNNEKF FNLPKGVAIS HPVANTYLLF AYPFNWIYDR IPGFRNLNVT AETIQKRFGI LGDPTMVGFI IGILLGFCGY GWKSPYHTII ASLQLGMYLA AVMLLLPRMT SIMMEGLVPL SNVARKKLVK RFPDRQITVG MDTALIVGHP SVIAPALLLI PVIVILAVIL PGNRVMPLGD LSQFVFFIAC MVPVFNGNII RTWVTSIILF GGGLYIASWM APATNEVFQK FGTNPDASVM YSSLNPSANP FTGLFAALSH VGIIGYVMAG ILLLSIGYLI KQKSRRQIET DLEKAL
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