Gene EcolC_1603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1603 
Symbol 
ID6065198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1783630 
End bp1784508 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content43% 
IMG OID641601019 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_001724589 
Protein GI170019635 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.982513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC GTAAAGGTAT TATTTTAGCG GGTGGTTCTG GTACACGTCT TTATCCTGTG 
ACTATGGCTG TCAGTAAACA GCTATTACCT ATTTATGATA AACCGATGAT CTATTACCCG
CTTTCTACAC TGATGTTAGC GGGTATTCGC GATATTTTGA TTATCAGTAC GCCGCAGGAT
ACTCCTCGTT TTCAACAACT GCTGGGTGAC GGGAGCCAGT GGGGGCTAAA TCTTCAGTAT
AAAGTGCAAC CGAGTCCAGA TGGTCTTGCG CAGGCATTTA TCATCGGTGA AGAGTTTATC
GGTGGTGATG ATTGTGCTTT GGTTCTTGGT GATAATATCT TCTACGGTCA TGATCTGCCG
AAGTTAATGG ATGTCGCTGT TAACAAAGAA AGTGGTGCAA CGGTATTTGC CTATCACGTT
AATGATCCTG AACGCTACGG TGTCGTTGAG TTTGATAAAA ACGGTACGGC AATCAGCCTG
GAAGAAAAAC CGTTACAACC AAAAAGTAAT TATGCGGTAA CCGGGCTTTA TTTCTATGAC
AACGACGTTG TCGAAATGGC GAAAAACCTT AAGCCTTCTT CCCGTGGTGA ACTAGAAATT
ACCGATATTA ACCGTATTTA TATGGAACAG GGGCGTTTAT CTGTTGCCAT GATGGGCCGT
GGTTATGCAT GGCTGGACAC GGGGACACAT CAAAGCCTGA TTGAGGCAAG CAACTTCATT
GCTACAATTG AAGAGCGTCA GGGGTTAAAA GTTTCCTGTC CGGAAGAAAT TGCTTACCGT
AAAGGATTTA TTGATTCTGA GCAGGTGAAA GTATTAGCTG AACCGCTGAA AAAAAATGCT
TATGGTCAGT ATCTGCTGAA AATGATTAAA GGTTATTAA
 
Protein sequence
MKTRKGIILA GGSGTRLYPV TMAVSKQLLP IYDKPMIYYP LSTLMLAGIR DILIISTPQD 
TPRFQQLLGD GSQWGLNLQY KVQPSPDGLA QAFIIGEEFI GGDDCALVLG DNIFYGHDLP
KLMDVAVNKE SGATVFAYHV NDPERYGVVE FDKNGTAISL EEKPLQPKSN YAVTGLYFYD
NDVVEMAKNL KPSSRGELEI TDINRIYMEQ GRLSVAMMGR GYAWLDTGTH QSLIEASNFI
ATIEERQGLK VSCPEEIAYR KGFIDSEQVK VLAEPLKKNA YGQYLLKMIK GY