Gene EcolC_1575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1575 
Symbol 
ID6066320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand+ 
Start bp1750268 
End bp1750909 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content49% 
IMG OID641600991 
Producturidine kinase 
Protein accessionYP_001724561 
Protein GI170019607 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0572] Uridine kinase 
TIGRFAM ID[TIGR00235] uridine kinase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0267753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC AGTCTCATCA GTGCGTCATT ATCGGTATCG CTGGCGCATC GGCTTCCGGC 
AAGAGTCTTA TTGCCAGTAC CCTTTATCGT GAATTGCGTG AGCAAGTCGG TGATGAACAC 
ATCGGCGTAA TTCCCGAAGA CTGCTATTAC AAAGATCAAA GCCATCTGTC GATGGAAGAA 
CGCGTTAAGA CCAACTACGA CCATCCCAGC GCGATGGATC ACAGTCTGCT GCTTGAGCAT 
TTACAAGCGT TGAAACGCGG CTCGGCAATT GACCTGCCGG TTTACAGCTA TGTTGAACAT 
ACGCGTATGA AAGAAACGGT GACGGTTGAG CCGAAGAAGG TCATCATTCT CGAAGGCATT 
TTGTTGCTGA CGGATGCGCG TTTGCGTGAC GAACTTAACT TCTCCATTTT CGTTGATACC 
CCGCTGGATA TCTGCCTGAT GCGCCGCATC AAGCGTGACG TTAACGAGCG TGGGCGTTCA 
ATGGATTCAG TGATGGCGCA ATATCAAAAA ACCGTGCGCC CGATGTTCCT GCAATTCATT 
GAGCCTTCTA AACAATATGC GGACATTATC GTGCCGCGCG GCGGGAAAAA CCGCATCGCG 
ATCGATATAT TGAAAGCGAA AATAAGTCAG TTCTTTGAAT AA
 
Protein sequence
MTDQSHQCVI IGIAGASASG KSLIASTLYR ELREQVGDEH IGVIPEDCYY KDQSHLSMEE 
RVKTNYDHPS AMDHSLLLEH LQALKRGSAI DLPVYSYVEH TRMKETVTVE PKKVIILEGI 
LLLTDARLRD ELNFSIFVDT PLDICLMRRI KRDVNERGRS MDSVMAQYQK TVRPMFLQFI 
EPSKQYADII VPRGGKNRIA IDILKAKISQ FFE