Gene EcolC_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1573 
Symbol 
ID6066214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1745676 
End bp1746524 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID641600989 
Product3-methyl-adenine DNA glycosylase II 
Protein accessionYP_001724559 
Protein GI170019605 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0966225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.876119 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATACCC TGAACTGGCA GCCGCCGTAT GACTGGTCGT GGATGTTGGG ATTTCTCGCC 
GCCCGTGCGG TGAGCAGTGT GGAAACGGTC GCGGACAGTT ATTATGCCCG TAGTCTGGCG
GTGGGCGAAT ATCGCGGCGT GGTGACTGCT ATTCCGGATA TAGCCCGCCA TACTCTGCAC
ATAAATTTAA GTGCAGGTTT AGAACCTGTT GCCGCAGAGT GTCTGGCGAA AATGAGCCGC
CTGTTTGATC TGCAATGTAA CCCACAAATT GTTAACGGTG CGTTGGGCAG GTTAGGCGCG
GCGCGGCCCG GATTGCGTTT ACCCGGCTGT GTTGATGCTT TTGAGCAGGG CGTGCGGGCG
ATTTTAGGCC AACTGGTGAG CGTGGCGATG GCGGCAAAAT TGACCGCCAG AGTGGCACAG
CTTTATGGCG AACGGCTGGA TGATTTTCCG GAGTATATCT GCTTCCCGAC GCCTCAGCGG
CTGGCAGCAG CAGACCCGCA GGCATTAAAA GCGTTAGGTA TGCCGTTGAA ACGGGCAGAG
GCGCTGATTC ATCTGGCAAA TGCGGCGCTG GAGGGCACCT TACCAATGAC AATACCGGGC
GATGTGGAGC AGGCGATGAA AACGCTGCAA ACTTTTCCGG GTATCGGGCG CTGGACGGCG
AATTATTTTG CTTTGCGTGG CTGGCAGGCG AAAGATGTTT TCCTGCCGGA TGATTATCTG
ATTAAACAGC GATTTCCGGG AATGACACCG GCGCAAATCC GCCGTTATGC CGAGCGCTGG
AAGCCCTGGC GTTCTTATGC GCTGTTGCAT ATCTGGTATA CGGAAGGCTG GCAACCAGAC
GAAGCATGA
 
Protein sequence
MYTLNWQPPY DWSWMLGFLA ARAVSSVETV ADSYYARSLA VGEYRGVVTA IPDIARHTLH 
INLSAGLEPV AAECLAKMSR LFDLQCNPQI VNGALGRLGA ARPGLRLPGC VDAFEQGVRA
ILGQLVSVAM AAKLTARVAQ LYGERLDDFP EYICFPTPQR LAAADPQALK ALGMPLKRAE
ALIHLANAAL EGTLPMTIPG DVEQAMKTLQ TFPGIGRWTA NYFALRGWQA KDVFLPDDYL
IKQRFPGMTP AQIRRYAERW KPWRSYALLH IWYTEGWQPD EA