Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1567 |
Symbol | |
ID | 6065883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1737842 |
End bp | 1739209 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641600983 |
Product | multidrug efflux system subunit MdtA |
Protein accession | YP_001724553 |
Protein GI | 170019599 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.331208 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCCCGT CATTCAGACG ATTCCAGACA GTGTTTCATA ATTCCTCCAT TTTTCTCCCT TATTGGCTGG CTACACTAGT ATCATTCCGC GAAACGTTTC AGGAAGAGAA ACTCTTAACG ATGAAAGGTA GTTATAAATC CCGTTGGGTA ATCGTAATCG TGGTGGTTAT CGCCGCCATC GCCGCATTCT GGTTCTGGCA AGGCCGCAAT GACTCCCGGA GTGCAGCCCC AGGGGCGACG AAACAAGCGC AGCAATCGCC AGCGGGTGGT CGACGTGGTA TGCGTTCCGG CCCATTAGCC CCGGTTCAGG CGGCGACCGC CGTAGAACAG GCAGTTCCGC GTTACCTCAC CGGGCTTGGC ACCATTACCG CCGCTAATAC CGTTACGGTG CGCAGCCGCG TGGACGGCCA ACTGATAGCG TTACATTTCC AGGAAGGCCA GCAGGTCAAA GCAGGCGATT TACTGGCAGA AATTGACCCC AGCCAGTTCA AAGTTGCATT AGCACAAGCC CAGGGCCAAC TGGCAAAAGA TAAAGCCACG CTTGCCAACG CCCGCCGTGA CCTGGCGCGT TATCAACAAC TGGCAAAAAC CAATCTCGTT TCCCGCCAGG AGCTGGATGC CCAACAGGCG CTGGTCAGTG AAACCGAAGG CACCATTAAG GCTGATGAAG CAAGCGTTGC CAGCGCGCAG CTGCAACTCG ACTGGAGCCG GATTACCGCA CCAGTCGATG GTCGCGTTGG TCTCAAGCAG GTTGATGTTG GTAACCAAAT CTCCAGTGGT GATACCACCG GGATCGTGGT GATCACCCAG ACGCATCCTA TCGATTTAGT CTTTACCCTG CCGGAAAGCG ATATCGCTAC CGTAGTGCAG GCGCAGAAAG CCGGAAAACC GCTGGTGGTA GAAGCCTGGG ATCGCACCAA CTCGAAGAAA TTAAGTGAAG GCACGCTGTT AAGTCTAGAT AACCAAATCG ATGCCACTAC CGGTACGATT AAAGTGAAAG CACGCTTTAA TAATCAGGAT GATGCGCTGT TTCCCAATCA GTTTGTTAAC GCGCGCATGT TAGTCGACAC CGAACAAAAC GCCGTAGTGA TCCCAACAGC CGCCCTGCAA ATGGGCAATG AAGGCCATTT TGTCTGGGTG CTGAATAGCG AAAACAAGGT CAGCAAACAT CTGGTGACGC CGGGCATTCA GGACAGTCAG AAAGTGGTGA TCCGTGCAGG TATTTCTGCG GGCGATCGCG TGGTGACAGA CGGCATTGAT CGCCTGACCG AAGGGGCGAA AGTGGAAGTG GTGGAAGCCC AGAGCGCCAC TACTCCGGAA GAGAAAGCCA CCAGCCGCGA ATACGCGAAA AAAGGAGCAC GCTCCTGA
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Protein sequence | MCPSFRRFQT VFHNSSIFLP YWLATLVSFR ETFQEEKLLT MKGSYKSRWV IVIVVVIAAI AAFWFWQGRN DSRSAAPGAT KQAQQSPAGG RRGMRSGPLA PVQAATAVEQ AVPRYLTGLG TITAANTVTV RSRVDGQLIA LHFQEGQQVK AGDLLAEIDP SQFKVALAQA QGQLAKDKAT LANARRDLAR YQQLAKTNLV SRQELDAQQA LVSETEGTIK ADEASVASAQ LQLDWSRITA PVDGRVGLKQ VDVGNQISSG DTTGIVVITQ THPIDLVFTL PESDIATVVQ AQKAGKPLVV EAWDRTNSKK LSEGTLLSLD NQIDATTGTI KVKARFNNQD DALFPNQFVN ARMLVDTEQN AVVIPTAALQ MGNEGHFVWV LNSENKVSKH LVTPGIQDSQ KVVIRAGISA GDRVVTDGID RLTEGAKVEV VEAQSATTPE EKATSREYAK KGARS
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