Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1555 |
Symbol | |
ID | 6065268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 1720719 |
End bp | 1722074 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641600971 |
Product | PTS system, galactitol-specific IIC subunit |
Protein accession | YP_001724541 |
Protein GI | 170019587 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCAG AAGTCATGCG TTATATTCTC GACCTCGGCC CTACGGTGAT GCTGCCGATT GTCATCATTA TTTTTTCTAA AATATTAGGC ATGAAGGCAG GCGATTGCTT TAAAGCGGGT CTGCATATCG GGATTGGCTT TGTTGGCATT GGCCTTGTGA TTGGCTTAAT GCTGGATTCC ATTGGCCCGG CGGCGAAAGC GATGGCGGAA AATTTCGACC TGAATCTGCA TGTGGTCGAT GTTAGCTGGC CGGGCTCTTC ACCAATGACC TGGGCGTCGC AAATTGCGCT GGTGGCGATT CCGATTGCGA TTCTGGTTAA CGTGGCGATG TTACTGACCC GTATGACGCG GGTGGTAAAT GTTGATATCT GGAATATCTG GCATATGACC TTCACCGGCG CGTTGCTGCA TCTGGCAACC GGTTCATGGA TGATAGGGAT GGCAGGTGTG GTAATTCACG CGGCGTTTGT TTATAAGCTC GGCGACTGGT TTGCCCGCGA TACCCGAAAT TTCTTTGAGC TGGAAGGTAT TGCTATTCCG CACGGTACGT CGGCGTATAT GGGGCCGATT GCGGTGCTGG TCGATGCTAT CATCGAGAAA ATCCCAGGCG TTAACCGAAT TAAATTTAGC GCCGACGATA TTCAGCGCAA ATTTGGTCCA TTTGGCGAGC CTGTCACCGT GGGTTTTGTG ATGGGGCTGA TTATCGGCAT CCTCGCGGGT TACGATGTCA AAGGTGTATT GCAGCTGGCG GTAAAAACGG CGGCAGTGAT GCTGCTAATG CCACGGGTGA TTAAACCCAT CATGGATGGT TTAACGCCCA TCGCTAAGCA GGCTCGTAGT CGTTTACAGG CGAAGTTCGG CGGTCAGGAG TTCCTGATTG GCCTTGATCC GGCGTTGCTG CTGGGACATA CGGCGGTGGT ATCGGCAAGC CTGATTTTTA TCCCACTCAC CATTTTAATT GCTGTTTGTG TGCCGGGTAA TCAGGTGCTG CCGTTTGGCG ATCTTGCCAC CATCGGCTTC TTCGTGGCGA TGGCGGTCGC CGTGCATCGT GGAAATCTGT TCCGCACCTT AATCTCGGGT GTCATCATTA TGAGCATCAC CCTGTGGATC GCGACGCAAA CTATTGGTTT GCACACCCAA CTGGCGGCTA ATGCTGGGGC GTTAAAAGCC GGGGGTATGG TGGCTTCAAT GGATCAGGGC GGTTCTCCCA TTACCTGGTT ACTGATTCAG GTTTTCTCCC CGCAAAATAT TCCCGGTTTC ATTATTATCG GTGCAATTTA TCTGACCGGT ATTTTCATGA CCTGGCGTAG AGCGCGTGGC TTTATTAAAC AAGAGAAAGT CGTTCTCGCA GAATAA
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Protein sequence | MFSEVMRYIL DLGPTVMLPI VIIIFSKILG MKAGDCFKAG LHIGIGFVGI GLVIGLMLDS IGPAAKAMAE NFDLNLHVVD VSWPGSSPMT WASQIALVAI PIAILVNVAM LLTRMTRVVN VDIWNIWHMT FTGALLHLAT GSWMIGMAGV VIHAAFVYKL GDWFARDTRN FFELEGIAIP HGTSAYMGPI AVLVDAIIEK IPGVNRIKFS ADDIQRKFGP FGEPVTVGFV MGLIIGILAG YDVKGVLQLA VKTAAVMLLM PRVIKPIMDG LTPIAKQARS RLQAKFGGQE FLIGLDPALL LGHTAVVSAS LIFIPLTILI AVCVPGNQVL PFGDLATIGF FVAMAVAVHR GNLFRTLISG VIIMSITLWI ATQTIGLHTQ LAANAGALKA GGMVASMDQG GSPITWLLIQ VFSPQNIPGF IIIGAIYLTG IFMTWRRARG FIKQEKVVLA E
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