| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1498 |
|---|
| Symbol | |
|---|
| ID | 6067108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1654776 |
|---|
| End bp | 1655774 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641600917 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001724487 |
|---|
| Protein GI | 170019533 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01168] Gram-positive signal peptide, YSIRK family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAGA AGGTGTTAAC CCTGTCTGCT GTGATGGCCA GCATGTTATT CGGTGCCGCT
GCACACGCTG CTGATACTCG CATTGGTGTA ACAATCTATA AGTACGACGA TAACTTTATG
TCTGTAGTGC GCAAGGCTAT TGAGCAAGAT GCGAAAGCCG CGCCAGATGT TCAGCTGCTG
ATGAATGATT CTCAGAATGA CCAGTCCAAG CAGAACGATC AGATCGACGT ATTGCTGGCG
AAAGGGGTGA AGGCACTGGC AATCAACCTG GTTGACCCGG CAGCTGCGGG TACGGTGATT
GAGAAAGCGC GTGGGCAAAA CGTGCCGGTG GTTTTCTTCA ACAAAGAACC GTCTCGTAAG
GCGCTGGATA GCTACGACAA AGCCTACTAC GTTGGCACTG ATTCCAAAGA GTCCGGCATT
ATTCAGGGCG ATTTGATTGC TAAACACTGG GCGGCGAATC AGGGTTGGGA TCTGAACAAA
GACGGTCAGA TTCAATTCGT ATTGCTGAAA GGTGAACCGG GCCATCCGGA TGCAGAAGCA
CGTACCACTT ACGTGATTAA AGAGCTGAAC GACAAAGGCA TTAAAACTGA ACAGTTACAG
TTAGATACCG CTATGTGGGA TACCGCTCAG GCGAAAGATA AGATGGACGC CTGGCTGTCT
GGCCCGAACG CCAACAAAAT CGAAGTGGTT ATCGCCAACA ACGATGCGAT GGCAATGGGC
GCGGTAGAAG CACTGAAAGC ACACAACAAG TCCAGCATTC CGGTGTTTGG CGTCGATGCG
CTGCCAGAAG CGCTGGCGCT GGTGAAATCC GGTGCACTGG CGGGCACAGT ACTGAACGAT
GCTAACAACC AGGCGAAAGC GACCTTTGAT CTGGCGAAAA ACCAGGCCGA TGGCAAAGGT
GCGGCTGATG GCACCAACTG GAAAATCGAC AACAAAGTGG TCCGCGTACC TTATGTTGGC
GTAGATAAAG ACAACCTGGC TGAATTCAGC AAGAAATAA
|
|---|
| Protein sequence | MNKKVLTLSA VMASMLFGAA AHAADTRIGV TIYKYDDNFM SVVRKAIEQD AKAAPDVQLL
MNDSQNDQSK QNDQIDVLLA KGVKALAINL VDPAAAGTVI EKARGQNVPV VFFNKEPSRK
ALDSYDKAYY VGTDSKESGI IQGDLIAKHW AANQGWDLNK DGQIQFVLLK GEPGHPDAEA
RTTYVIKELN DKGIKTEQLQ LDTAMWDTAQ AKDKMDAWLS GPNANKIEVV IANNDAMAMG
AVEALKAHNK SSIPVFGVDA LPEALALVKS GALAGTVLND ANNQAKATFD LAKNQADGKG
AADGTNWKID NKVVRVPYVG VDKDNLAEFS KK
|
|---|
| |