Gene EcolC_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1348 
Symbol 
ID6068190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1478322 
End bp1479215 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content55% 
IMG OID641600770 
Producthypothetical protein 
Protein accessionYP_001724341 
Protein GI170019387 
COG category[R] General function prediction only 
COG ID[COG1090] Predicted nucleoside-diphosphate sugar epimerase 
TIGRFAM ID[TIGR01777] conserved hypothetical protein TIGR01777 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.303624 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATAG TGATCACCGG AGGGACAGGA TTAATTGGTC GCCATTTGAT TCCGCGTTTG 
CTGGAGCTGG GCCATCAAAT TACGGTAGTG ACGCGTAACC CGCAGAAAGC CAGTTCCGTT
CTCGGCCCTC GGGTGACACT ATGGCAAGGG CTTGCCGATC AAAGCAACCT CAACGGCGTT
GATGCGGTAA TCAACCTGGC CGGAGAACCG ATTGCTGATA AACGCTGGAC TCACGAGCAA
AAAGAGCGTC TCTGCCAAAG CCGCTGGAAT ATCACGCAAA AACTGGTCGA TTTGATTAAT
GCCAGCGACA CGCCACCGTC GGTACTCATT TCCGGCTCGG CAACGGGCTA TTATGGTGAC
TTAGGTGAAG TGGTGGTTAC CGAAGAGGAA CCGCCGCATA ACGAATTTAC CCATAAACTC
TGCGCTCGCT GGGAAGAAAT TGCCTGCCGG GCGCAAAGTG ACAAAACGCG AGTGTGCCTG
CTGCGTACCG GTGTAGTGCT GGCACCGGAT GGCGGTATTC TCGGTAAAAT GCTGCCGCCG
TTTCGTCTTG GCCTGGGCGG GCCGATTGGC TCTGGTCGGC AGTATCTGGC CTGGATTCAT
ATTGATGATA TGGTCAACGG TATTCTCTGG CTGCTGGATA ACGAGCTGCG CGGGCCATTT
AATATGGTTT CGCCCTACCC GGTACGCAAT GAACAATTTG CCCATGCGCT CGGTCATGCG
CTGCATCGCC CGGCCATTTT GCGCGTCCCC GCGACCGCCA TTCGACTGTT AATGGGCGAA
TCTTCAGTAC TGGTATTAGG TGGACAACGC GCGCTGCCTA AACGGCTGGA AGAAGCGGGT
TTTGCGTTTC GCTGGTACGA TTTAGAAGAG GCGCTGGCGG ATGTCGTTCG CTGA
 
Protein sequence
MNIVITGGTG LIGRHLIPRL LELGHQITVV TRNPQKASSV LGPRVTLWQG LADQSNLNGV 
DAVINLAGEP IADKRWTHEQ KERLCQSRWN ITQKLVDLIN ASDTPPSVLI SGSATGYYGD
LGEVVVTEEE PPHNEFTHKL CARWEEIACR AQSDKTRVCL LRTGVVLAPD GGILGKMLPP
FRLGLGGPIG SGRQYLAWIH IDDMVNGILW LLDNELRGPF NMVSPYPVRN EQFAHALGHA
LHRPAILRVP ATAIRLLMGE SSVLVLGGQR ALPKRLEEAG FAFRWYDLEE ALADVVR