| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1342 |
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| Symbol | |
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| ID | 6068211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1473132 |
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| End bp | 1473914 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641600764 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001724335 |
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| Protein GI | 170019381 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.232393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.759434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAGT CGATTCTCGC TCTGTCTTTG TTAGTCGGTC TCTCCACAGC GGCTTCCAGC
TATGCGGCGC TACCGGAGAC GGTACGTATC GGAACCGATA CCACCTACGC ACCGTTCTCA
TCGAAAGATG CTAAAGGTGA TTTTGTTGGC TTTGATATCG ATCTCGGTAA CGAGATGTGC
AAACGGATGC AGGTGAAATG TACCTGGGTT GCCAGTGACT TTGACGCGCT GATCCCCTCA
CTGAAAGCGA AAAAAATCGA CGCTATTATT TCGTCGCTTT CCATTACCGA TAAACGTCAG
CAGGAGATTG CCTTCTCCGA CAAGCTGTAC GCCGCAGATT CTCGTTTGAT TGCGGCCAAA
GGTTCACCGA TTCAGCCAAC GCTGGATTCA CTGAAAGGTA AACATGTTGG TGTGCTGCAG
GGATCAACCC AGGAAGCTTA CGCTAACGAG ACCTGGCGTA GTAAAGGCGT GGATGTGGTG
GCCTATGCCA ACCAGGATTT GGTCTATTCC GATCTGGCTG CAGGACGTCT GGATGCTGCG
TTACAAGATG AAGTTGCTGC CAGCGAAGGA TTCCTCAAGC AACCTGCTGG TAAAGATTTC
GCCTTTGCTG GCTCATCAGT AAAAGACAAA AAATACTTCG GTGATGGCAC CGGTGTAGGG
CTACGTAAAG ATGATGCTGA ACTGACGGCT GCCTTCAATA AGGCGCTTGG CGAGCTGCGT
CAGGACGGCA CCTACGACAA GATGGCGAAA AAGTATTTCG ACTTTAATGT CTACGGTGAC
TGA
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| Protein sequence | MKKSILALSL LVGLSTAASS YAALPETVRI GTDTTYAPFS SKDAKGDFVG FDIDLGNEMC
KRMQVKCTWV ASDFDALIPS LKAKKIDAII SSLSITDKRQ QEIAFSDKLY AADSRLIAAK
GSPIQPTLDS LKGKHVGVLQ GSTQEAYANE TWRSKGVDVV AYANQDLVYS DLAAGRLDAA
LQDEVAASEG FLKQPAGKDF AFAGSSVKDK KYFGDGTGVG LRKDDAELTA AFNKALGELR
QDGTYDKMAK KYFDFNVYGD
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