| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1312 |
|---|
| Symbol | fadJ |
|---|
| ID | 6068474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1441710 |
|---|
| End bp | 1443854 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641600734 |
|---|
| Product | multifunctional fatty acid oxidation complex subunit alpha |
|---|
| Protein accession | YP_001724305 |
|---|
| Protein GI | 170019351 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.474156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATGG CATCAGCGTT TACTCTTAAT GTTCGTCTGG ACAACATTGC TATCATCACC
ATCGACGTAC CGGATGAGAA AATGAATACC CTGAAGGCGG AATTTGCCTC GCAGGTGCGC
GCCATTATTA AGCAACTCCG TGAAAACAAA GAGTTGCGCG GCGTGGTGTT TATCTCCGCG
AAACCGGACA ATTTTATCGC CGGAGCAGAC ATCAACATGA TCGGCAACTG CAAAACGGCG
CAAGAAGCGG AAGCTCTGGC GCGGCAGGGC CAACAGTTGA TGGCGGAGAT TCATGCTTTG
CCCATTCCGG TTATCGCGGC TATTCATGGC GCTTGCCTGG GCGGTGGGCT GGAGCTGGCG
CTGGCGTGCC ACGGTCGCGT TTGTACTGAC GATCCTAAAA CGGTGCTCGG TTTGCCTGAA
GTACAACTTG GATTGTTACC CGGTTCAGGC GGCACCCAGC GTTTACCGCG TCTCATAGGC
GTCAGCACAG CATTAGAGAT GATCCTCACC GGAAAACAAC TTCGGGCGAA ACAGGCGTTA
AAGCTGGGGC TGGTGGATGA CGTCGTTCCG CACTCCATTT TGCTGGAAGC CGCTGTTGAG
CTGGTAAAGC AGGATCGTCC ATCTTCCCGC CCTCTACCTG TACGCGAGCG TATTCTGGCG
GGGCCGTTAG GTCGTGCGTT GCTGTTCAAA ATGGTCGGCA AGAAAACAGA ACACAAAACT
CAAGGTAACT ATCCGGCGAC AGAACGCATC CTGGAGGTTG TCGAAACGGG ATTAGCGCAG
GGCACCAGCA GTGGCTATGA CGCTGAAGCA CGGGCGTTTG GCGAACTGGC GATGACGCCG
CAATCGCAGG CTCTGCGTAG TATCTTTTTT GCCAGTACGG ACGTGAAGAA AGATCCCGGC
AGTGATGCGC CGCCTGCGCC ATTAAACAGC GTGGGGATTT TAGGTGGTGG CTTGATGGGC
GGCGGTATTG CTTATGTCAC TGCTTGTAAA GCGGGGCTTC CGGTCAGAAT TAAAGATATC
AACCCGCAGG GCATAAATCA TGCGCTGAAG TACAGTTGGG ATCAGCTGGA GGGCAAAGTT
CGCCGTCGTC ATCTCAAAGC CAGCGAACGT GACAAACAGC TGGCATTAAT CTCCGGAACG
ACGGACTATC GCGGCTTTGC CCATCGCGAT CTGATTATTG AAGCGGTGTT TGAAAATCTC
GAATTAAAAC AACAGATGGT GGCGGAAGTG GAGCAAAATT GCGCCGCTCA TACCATCTTT
GCTTCGAATA CGTCATCTTT GCCGATTGGT GATATCGCCG CTCACGCCAC GCGACCTGAG
CAAGTTATCG GCCTGCATTT CTTCAGTCCG GTGGAAAAAA TGCCGCTGGT GGAGATTATT
CCTCATGCTG GTACATCAGC GCAAACCATC GCCACTACGG TAAAACTGGC GAAAAAACAG
GGCAAAACGC CCATTGTCGT GCGTGACAAA GCCGGGTTTT ACGTCAATCG CATCTTAGCG
CCTTACATTA ATGAAGCTAT CCGCATGCTG ACCGAAGGTG AACGGGTAGA GCACATTGAT
GCCGCGCTAG TGAAATTTGG TTTTCCGGTA GGTCCAATCC AACTTTTGGA TGAGGTAGGA
ATCGACACCG GGACTAAAAT TATTCCTGTA CTGGAAGCCG CTTATGGAGA ACGTTTTAGC
GCGCCTGCAA ATGTTGTTTC TTCAATTTTG AACGACGATC GCAAAGGCAG AAAAAATGGT
CGGGGTTTCT ATCTTTATGG TCAGAAAGGG CGTAAAAGCA AAAAACAGGT CGATCCTGCC
ATTTACCCGC TCATTGGCGC ACAAGGGCAG GGGCGACTCT CCGCACCGCA GGTTGCTGAA
CGGTGTGTGA TGTTGATGCT GAATGAAGCA GTACGTTGTG TTGATGAGCA GGTTATCCGT
AGCGTGCGTG ACGGGGATAT TGGTGCGGTA TTTGGCATTG GTTTTCCGCC ATTTCTCGGT
GGACCGTTCC GCTATATCGA TTCTCTCGGC GCGGGCGAAG TGGTTGCAAT AATGCAACGA
CTGGCCACGC AGTATGGTTC CCGTTTTACC CCTTGCGAGC GTTTAGTCGA GATGAGCAAG
CGTGGGGAAA GTTTTTGGAA AACAACTGCA ACTGACCTGC AATAA
|
|---|
| Protein sequence | MEMASAFTLN VRLDNIAIIT IDVPDEKMNT LKAEFASQVR AIIKQLRENK ELRGVVFISA
KPDNFIAGAD INMIGNCKTA QEAEALARQG QQLMAEIHAL PIPVIAAIHG ACLGGGLELA
LACHGRVCTD DPKTVLGLPE VQLGLLPGSG GTQRLPRLIG VSTALEMILT GKQLRAKQAL
KLGLVDDVVP HSILLEAAVE LVKQDRPSSR PLPVRERILA GPLGRALLFK MVGKKTEHKT
QGNYPATERI LEVVETGLAQ GTSSGYDAEA RAFGELAMTP QSQALRSIFF ASTDVKKDPG
SDAPPAPLNS VGILGGGLMG GGIAYVTACK AGLPVRIKDI NPQGINHALK YSWDQLEGKV
RRRHLKASER DKQLALISGT TDYRGFAHRD LIIEAVFENL ELKQQMVAEV EQNCAAHTIF
ASNTSSLPIG DIAAHATRPE QVIGLHFFSP VEKMPLVEII PHAGTSAQTI ATTVKLAKKQ
GKTPIVVRDK AGFYVNRILA PYINEAIRML TEGERVEHID AALVKFGFPV GPIQLLDEVG
IDTGTKIIPV LEAAYGERFS APANVVSSIL NDDRKGRKNG RGFYLYGQKG RKSKKQVDPA
IYPLIGAQGQ GRLSAPQVAE RCVMLMLNEA VRCVDEQVIR SVRDGDIGAV FGIGFPPFLG
GPFRYIDSLG AGEVVAIMQR LATQYGSRFT PCERLVEMSK RGESFWKTTA TDLQ
|
|---|
| |