| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1290 |
|---|
| Symbol | |
|---|
| ID | 6068665 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 1412791 |
|---|
| End bp | 1414029 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641600711 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_001724283 |
|---|
| Protein GI | 170019329 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACA CTCGCCCTGA ACGTCGCTTT ACGCGCATTG ATCGTCTCCC GCCCTACGTT
TTTAACATCA CCGCTGAACT GAAAATGGCT GCGCGTCGGC GCGGCGAAGA TATTATCGAT
TTCAGCATGG GTAACCCGGA CGGTGCGACT CCGCCGCATA TCGTCGAAAA ATTATGTACT
GTGGCCCAGC GCCCGGACAC GCATGGTTAC TCCACTTCAC GCGGCATTCC GCGGTTACGT
CGCGCCATTT CCCGCTGGTA TCAGGATCGC TACGACGTTG AAATCGACCC GGAATCAGAA
GCCATCGTCA CTATTGGTTC GAAAGAGGGC CTGGCGCATC TGATGCTGGC GACGCTGGAT
CATGGTGACA CGGTGCTGGT GCCGAATCCA AGTTACCCGA TCCATATTTA TGGCGCGGTG
ATTGCCGGGG CGCAGGTACG CTCAGTGCCG CTGGTGGAAG GTGTCGATTT CTTCAACGAA
CTGGAGCGAG CCATTCGTGA AAGTTATCCG AAACCGAAGA TGATGATCCT CGGCTTCCCG
TCAAACCCAA CCGCGCAATG CGTGGAACTG GAGTTCTTCG AAAAAGTAGT GGCGCTGGCG
AAACGCTACG ATGTGCTGGT GGTCCATGAC CTGGCCTATG CCGATATCGT CTACGATGGC
TGGAAAGCGC CGTCAATTAT GCAGGTACCG GGTGCACGCG ATGTGGCAGT CGAGTTCTTT
ACGCTGTCGA AAAGCTACAA CATGGCGGGC TGGCGTATCG GCTTTATGGT TGGCAACAAA
ACGCTGGTCA GCGCCCTGGC TCGTATTAAA AGCTATCACG ATTACGGCAC CTTTACGCCG
TTGCAGGTGG CGGCGATTGC GGCGCTGGAG GGCGATCAAC AGTGCGTGCG CGACATTGCC
GAACAGTACG AACGCCGCCG TGATGTATTG GTTAAAGGGC TGCATGAAGC GGGCTGGATG
GTTGAAATGC CGAAGGCTTC GATGTATGTC TGGGCGAAAA TCCCGGAACC ATATGCGGCC
ATGGGATCGC TGGAATTTGC CAAGAAGCTC CTTAACGAAG CGAAGGTTTG TGTCTCGCCG
GGGATTGGCT TTGGCGACTA TGGTGATACG CATGTTCGCT TTGCACTGAT TGAAAACCGC
GACCGTATTC GTCAGGCCAT CAGAGGGATT AAAACGATGT TCCGTGCCGA CGGTTTACTA
CCCGCCAGCA GCAAACATAT TCACGAAAAC GCGGAATAA
|
|---|
| Protein sequence | MADTRPERRF TRIDRLPPYV FNITAELKMA ARRRGEDIID FSMGNPDGAT PPHIVEKLCT
VAQRPDTHGY STSRGIPRLR RAISRWYQDR YDVEIDPESE AIVTIGSKEG LAHLMLATLD
HGDTVLVPNP SYPIHIYGAV IAGAQVRSVP LVEGVDFFNE LERAIRESYP KPKMMILGFP
SNPTAQCVEL EFFEKVVALA KRYDVLVVHD LAYADIVYDG WKAPSIMQVP GARDVAVEFF
TLSKSYNMAG WRIGFMVGNK TLVSALARIK SYHDYGTFTP LQVAAIAALE GDQQCVRDIA
EQYERRRDVL VKGLHEAGWM VEMPKASMYV WAKIPEPYAA MGSLEFAKKL LNEAKVCVSP
GIGFGDYGDT HVRFALIENR DRIRQAIRGI KTMFRADGLL PASSKHIHEN AE
|
|---|
| |