Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1194 |
Symbol | |
ID | 6065193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1308904 |
End bp | 1310922 |
Gene Length | 2019 bp |
Protein Length | 672 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641600609 |
Product | hydrogenase 4 subunit B |
Protein accession | YP_001724187 |
Protein GI | 170019233 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCCC TGCAATTATT AACCTGGTCG CTGATCCTCT ATCTGTTTGC CAGTCTGGCT TCGCTGTTTT TACTCGGTCT GGACAGACTG GCTATTAAGC TTTCCGGCAT CACATCGCTG GTGGGCGGCG TGATTGGCAT CATCAGCGGA ATTACGCAAT TACATGCTGG TGTAACTTTA GTCGCCCATT TTGCCACCCC TTTTGACTTT GCCGATTTAA CCCTGCGAAT GGATAGCCTC TCGGCATTTA TGGTGCTGGT TATCTCCTTG CTGGTGGTGG TTTGTTCGCT CTATTCATTG ACTTATATGC GCGAATACGA GGGCAAAGGC GCGGCGGCGA TGGGCTTCTT TATGAATCTT TTCATCGCAT CGATGGTTGC CCTGCTGGTG ATGGACAACG CTTTTTGGTT CATCGTGCTG TTTGAAATGA TGTCGCTGTC TTCCTGGTTT CTGGTCATTG CCAGGCAGGA TAAAACGTCG ATCAACGCTG GCATGCTCTA CTTTTTTATC GCCCACGCCG GATCGGTGCT GATAATGATC GCCTTCTTGC TGATGGGGCG CGAAAGCGGC AGCCTCGATT TTGCCAGTTT CCGCACGCTT TCACTTTCTC CGGGGCTGGC GTCGGCGGTG TTCCTGCTGG CCTTTTTCGG TTTTGGCGCG AAAGCCGGGA TGATGCCGTT GCACAGCTGG TTGCCGCGCG CTCACCCTGC CGCACCATCG CACGCTTCAG CGTTGATGTC TGGCGTAATG GTCAAAATCG GTATTTTCGG CATCCTGAAA GTGGCGATGG ATCTGCTGGC GCAAACGGGT TTGCCGCTGT GGTGGGGCAT TCTGGTGATG GCGATCGGCG CAATCTCCGC GCTCCTGGGC GTGCTGTATG CGCTGGCGGA ACAGGATATC AAACGGCTAC TGGCCTGGAG TACCGTCGAA AACGTCGGCA TTATTTTGCT GGCGGTCGGT GTGGCGATAG TCGGTCTGTC ACTGCACGAC CCGCTGCTCA CCGTGGTTGG ACTGCTCGGC GCACTGTTTC ATCTGCTCAA CCATGCGCTG TTCAAAGGGC TGCTATTTCT CGGCGCGGGC GCGATTATTT CGCGTTTGCA TACCCACGAC ATGGAAAAAA TGGGGGCACT GGCGAAACGG ATGCCGTGGA CAGCCGCAGC ATGCCTGATT GGTTGCCTGG CGATATCAGC CCTTCCTCCG CTGAATGGTT TTATCAGCGA ATGGTACACC TGGCAGTCGC TGTTCTCACT AAGTCGTGTG GAAGCCGTAG CGCTACAACT TGCGGGTCCT ATTGCTATGG TAATGCTGGC AGTCACTGGT GGGCTGGCAG TAATGTGCTT CGTAAAAATG TACGGTATTA CTTTCTGTGG TGCGCCGCGC AGTACACACG CTGAAGAGGC ACAGGAAGTG CCAAATACGA TGATCGTCGC CATGCTACTG CTCGCGGCAC TCTGCGTATT AATTGCGCTT AGTGCCAGTT GGCTGGCACC GAAGATAATG CATATTGCCC ATGCGTTTAC CGATACCCCT CCCGTCACTG TCGCCAGCGG AATAGCACTT GTACCCGGCA CGTTTCATAC ACGGGTCACT CCTTCATTAC TGTTGCTGTT ACTACTGGCG ATGCCTTTGC TGCCTGGCCT TTACTGGCTG TGGTGTCGTT CGCGCCGCGC AGCGTTTCGT CGCACAGGAG ATGCCTGGGC ATGCGGCTAC AGCTGGGAAA ATGCGATGGC CCCGTCAGGC AATGGCGTGA TGCAGCCGCT GCGTGTGGTC TTTTCTGCGC TATTTCGTCT ACGACAACAG CTCGACCCTA CGCTGAGGCT AAATAAAGGT CTTGCGCACG TCACCGCCAG GGCTCAGAGC ACAGAACCCT TCTGGGATGA GCGGGTGATC CGCCCCATCG TGAGCGCCAC CCAACGGCTG GCCAAAGAAA TACAGCATCT GCAAAGCGGC GACTTTCGTC TCTATTGCCT GTATGTGGTC GCCGCACTGG TTGTGCTGCT AATCGCTATT GCCGTCTAA
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Protein sequence | MDALQLLTWS LILYLFASLA SLFLLGLDRL AIKLSGITSL VGGVIGIISG ITQLHAGVTL VAHFATPFDF ADLTLRMDSL SAFMVLVISL LVVVCSLYSL TYMREYEGKG AAAMGFFMNL FIASMVALLV MDNAFWFIVL FEMMSLSSWF LVIARQDKTS INAGMLYFFI AHAGSVLIMI AFLLMGRESG SLDFASFRTL SLSPGLASAV FLLAFFGFGA KAGMMPLHSW LPRAHPAAPS HASALMSGVM VKIGIFGILK VAMDLLAQTG LPLWWGILVM AIGAISALLG VLYALAEQDI KRLLAWSTVE NVGIILLAVG VAIVGLSLHD PLLTVVGLLG ALFHLLNHAL FKGLLFLGAG AIISRLHTHD MEKMGALAKR MPWTAAACLI GCLAISALPP LNGFISEWYT WQSLFSLSRV EAVALQLAGP IAMVMLAVTG GLAVMCFVKM YGITFCGAPR STHAEEAQEV PNTMIVAMLL LAALCVLIAL SASWLAPKIM HIAHAFTDTP PVTVASGIAL VPGTFHTRVT PSLLLLLLLA MPLLPGLYWL WCRSRRAAFR RTGDAWACGY SWENAMAPSG NGVMQPLRVV FSALFRLRQQ LDPTLRLNKG LAHVTARAQS TEPFWDERVI RPIVSATQRL AKEIQHLQSG DFRLYCLYVV AALVVLLIAI AV
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