Gene EcolC_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1179 
Symbol 
ID6064741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1292588 
End bp1293877 
Gene Length1290 bp 
Protein Length429 aa 
Translation table11 
GC content52% 
IMG OID641600595 
Producturacil transporter 
Protein accessionYP_001724173 
Protein GI170019219 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0295094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGCC GTGCTATCGG GGTGAGTGAA AGACCGCCAC TTTTACAGAC AATCCCGCTT 
AGTTTGCAAC ATTTGTTCGC CATGTTTGGT GCAACCGTCC TGGTGCCCGT CTTATTTCAT
ATTAACCCGG CGACTGTACT GTTATTTAAC GGTATTGGAA CGCTGCTGTA TCTCTTCATC
TGTAAAGGGA AAATTCCGGC TTATCTTGGT TCCAGCTTTG CCTTTATTTC ACCGGTATTG
TTACTGTTGC CGTTAGGGTA TGAAGTCGCG CTGGGCGGCT TTATTATGTG CGGCGTGCTG
TTCTGCCTGG TTTCTTTTAT CGTGAAGAAA GCGGGGACCG GCTGGCTGGA CGTGCTGTTT
CCACCTGCGG CAATGGGCGC AATCGTTGCC GTCATCGGTC TGGAGCTGGC GGGCGTAGCT
GCCGGTATGG CGGGTTTACT CCCGGCTGAA GGGCAAACGC CAGACTCCAA AACCATCATC
ATCTCTATTA CCACCCTGGC GGTCACGGTT TTAGGTTCCG TGCTGTTCCG TGGTTTCCTG
GCAATTATCC CGATTTTAAT TGGCGTGCTG GTGGGGTACG CGCTCTCTTT CGCAATGGGA
ATTGTCGATA CCACGCCGAT TATTAATGCT CACTGGTTTG CGCTGCCAAC CCTCTATACG
CCGCGCTTCG AGTGGTTTGC CATTCTGACT ATTCTGCCAG CGGCGTTAGT GGTTATTGCC
GAACACGTAG GGCACCTGGT AGTAACGGCT AATATCGTCA AAAAAGATCT GCTGCGCGAT
CCAGGTCTGC ACCGTTCGAT GTTTGCTAAC GGCCTGTCGA CTGTGATCTC CGGCTTCTTT
GGCTCTACGC CAAATACCAC TTACGGAGAA AACATTGGCG TGATGGCGAT CACCCGTGTT
TACAGTACTT GGGTTATCGG CGGGGCGGCG ATTTTCGCTA TCCTGCTTTC CTGCGTCGGT
AAACTGGCTG CCGCTATCCA GATGATCCCA TTGCCGGTGA TGGGCGGCGT TTCGCTGCTG
CTTTATGGTG TCATCGGTGC TTCCGGTATT CGTGTTTTGA TCGAATCGAA AGTGGATTAC
AACAAAGCAC AGAACCTGAT CCTGACTTCC GTGATTTTGA TCATCGGCGT CAGTGGCGCG
AAGGTAAACA TCGGCGCGGC GGAGTTGAAA GGTATGGCGC TGGCGACCAT CGTCGGTATC
GGCTTAAGTT TGATCTTCAA ACTGATCAGT GTGCTGCGCC CTGAAGAAGT GGTGCTGGAC
GCAGAAGACG CGGATATAAC AGACAAATAA
 
Protein sequence
MTRRAIGVSE RPPLLQTIPL SLQHLFAMFG ATVLVPVLFH INPATVLLFN GIGTLLYLFI 
CKGKIPAYLG SSFAFISPVL LLLPLGYEVA LGGFIMCGVL FCLVSFIVKK AGTGWLDVLF
PPAAMGAIVA VIGLELAGVA AGMAGLLPAE GQTPDSKTII ISITTLAVTV LGSVLFRGFL
AIIPILIGVL VGYALSFAMG IVDTTPIINA HWFALPTLYT PRFEWFAILT ILPAALVVIA
EHVGHLVVTA NIVKKDLLRD PGLHRSMFAN GLSTVISGFF GSTPNTTYGE NIGVMAITRV
YSTWVIGGAA IFAILLSCVG KLAAAIQMIP LPVMGGVSLL LYGVIGASGI RVLIESKVDY
NKAQNLILTS VILIIGVSGA KVNIGAAELK GMALATIVGI GLSLIFKLIS VLRPEEVVLD
AEDADITDK