Gene EcolC_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1131 
Symbol 
ID6068023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1236098 
End bp1237096 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content56% 
IMG OID641600547 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001724125 
Protein GI170019171 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT CGTCATTATC ATTGCCGCAG GGCAAGAGCG TCTCGCTCAA ACAATTTGTC 
AGTCGCCATA TTAATGAGAT CGGTTTGCTG GTGGTAATCG CCATTCTTTA TCTGGTCTTC
TCCCTGAACG CGCCTGGCTT TATCTCATTG AATAACCAGA TGAACGTGCT GCGCGATGCC
GCCACCATTG GGATTGCCGC CTGGGCGATG ACGCTGATTA TTATCTCCGG TGAAATTGAT
GTCAGCGTTG GGCCGATGGT GGCTTTTGTC TCGGTGTGCC TGGCATTTTT GCTGCAATTT
GAAGTTCCGT TGGCGATTGC TTGTCTGCTG GTGTTGCTGT TAGGCGCGCT GATGGGAACG
CTCGCCGGGG TGCTGCGCGG CGTGTTTAAC GTACCAAGTT TCGTTGCCAC ACTGGGGCTG
TGGAGCGCCC TGCGCGGAAT GGGGCTGTTT ATGACCAACG CACTGCCAGT GCCGATTGAC
GAAAACGAGG TGCTGGACTG GCTGGGCGGA CAATTTCTCG GTGTGCCAGT ATCCGCGCTG
ATCATGATGG TGTTGTTTGC GCTGTTTGTG TTCATTAGCC GAAAAACCGC CTTCGGGCGC
TCGGTTTTTG CCGTTGGCGG TAATGCCACG GCGGCGCAGT TGTGCGGCAT CAACGTTCGT
CGGGTACGCA TTCTTATCTT TACCCTTTCG GGATTATTAG CGGCGGTGAC CGGCATTTTG
TTGGCGGCGC GCCTCGGTTC CGGTAACGCA GGTGCCGCAA ACGGTCTGGA GTTTGACGTC
ATCGCCGCGG TCGTGGTCGG CGGTACGGCA CTTTCCGGCG GTCGCGGTTC CCTGTTCGGT
ACATTGCTTG GTGTGCTGGT GATTACGCTA ATCGGTAACG GTCTGGTGCT GCTCGGTATT
AACTCCTTTT TCCAGCAGGT GGTACGCGGC GTCATCATCG TGGTGGCGGT GCTGGCGAAT
ATCTTGCTGA CCCAGCGAAG CAGTAAAGCG AAACGCTAA
 
Protein sequence
MSASSLSLPQ GKSVSLKQFV SRHINEIGLL VVIAILYLVF SLNAPGFISL NNQMNVLRDA 
ATIGIAAWAM TLIIISGEID VSVGPMVAFV SVCLAFLLQF EVPLAIACLL VLLLGALMGT
LAGVLRGVFN VPSFVATLGL WSALRGMGLF MTNALPVPID ENEVLDWLGG QFLGVPVSAL
IMMVLFALFV FISRKTAFGR SVFAVGGNAT AAQLCGINVR RVRILIFTLS GLLAAVTGIL
LAARLGSGNA GAANGLEFDV IAAVVVGGTA LSGGRGSLFG TLLGVLVITL IGNGLVLLGI
NSFFQQVVRG VIIVVAVLAN ILLTQRSSKA KR