Gene EcolC_1116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1116 
Symbol 
ID6067947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1213316 
End bp1214164 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content52% 
IMG OID641600532 
Productputative DNA-binding transcriptional regulator 
Protein accessionYP_001724110 
Protein GI170019156 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCT TACTTCGTAT CCGTCAGCGT TACCAGGGGC TTGCCCAGAG TGATAAAAAA 
CTGGCGGATT ATCTGCTGCT ACAACCTGAT ACGGCGCGCC ATTTAAGCTC TCAGCAACTG
GCCAACGAAG CCGGAGTCAG TCAGTCCAGC GTCGTGAAGT TCGCGCAAAA ACTCGGCTAT
AAAGGTTTTC CGGCGCTTAA GTTGGCGTTG AGTGAAGCGC TGGCAAGCCA GCCGGAATCA
CCCTCCGTGC CCATTCATAA CCAAATCCGC GGTGATGATC CGTTACGGCT GGTCGGCGAA
AAACTGATCA AAGAAAATAC TGCCGCTATG TACGCAACGC TAAACGTTAA TAGTGAAGAG
AAACTGCATG AATGCGTAAC AATGTTGCGC TCTGCGCGGC GGATAATTCT GACCGGTATT
GGCGCTTCGG GTCTGGTGGC GCAAAACTTT GCCTGGAAGC TGATGAAGAT TGGCTTCAAT
GCTGCCGCAG TGCGCGATAT GCATGCGCTA CTCGCAACAG TACAGGTGTC GTCCCCTGAC
GATCTGTTAT TAGCCATTTC CTACACCGGT GTACGACGCG AGTTAAACCT GGCGGCAGAT
GAGATGCTGC GAGTGGGCGG AAAAGTGCTG GCGATTACCG GCTTTACTCC GAATGCCCTG
CAACAGCGTG CTTCTCATTG CCTGTATACC ATTGCCGAAG AACAAGCGAC AAACAGTGCT
TCAATCTCTG CTTGTCACGC TCAGGGAATG TTAACGGATT TGCTGTTCAT TGCGCTGATT
CAGCAGGATC TGGAACTGGC ACCAGAACGT ATTCGTCATA GTGAAGCGCT GGTGAAAAAA
CTGGTCTGA
 
Protein sequence
MNGLLRIRQR YQGLAQSDKK LADYLLLQPD TARHLSSQQL ANEAGVSQSS VVKFAQKLGY 
KGFPALKLAL SEALASQPES PSVPIHNQIR GDDPLRLVGE KLIKENTAAM YATLNVNSEE
KLHECVTMLR SARRIILTGI GASGLVAQNF AWKLMKIGFN AAAVRDMHAL LATVQVSSPD
DLLLAISYTG VRRELNLAAD EMLRVGGKVL AITGFTPNAL QQRASHCLYT IAEEQATNSA
SISACHAQGM LTDLLFIALI QQDLELAPER IRHSEALVKK LV