Gene EcolC_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1088 
Symbol 
ID6065374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1177878 
End bp1178609 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID641600500 
Producthypothetical protein 
Protein accessionYP_001724082 
Protein GI170019128 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000709492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000258104 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAGTAAGC TGATTGTCCC GCAGTGGCCG CTGCCAAAGG GTGTTGCGGC TTGTAGCTCT 
ACTCGTATCG GCGGCGTGAG CTTGCCCCCG TATGACTCGC TCAACCTCGG TGCCCATTGT
GGCGATAACC CGGATCACGT TGAGGAGAAT CGCAAGCGAC TTTTTGCTGC GGGCAATTTG
CCTTCTAAAC CGGTCTGGCT TGAGCAGGTA CACGGCAAAG ATGTGCTTAA GCTTACTGGC
GAACCTTATG CCTCAAAACG AGCAGATGCC TCTTATAGCA ATACGCCTGG CACGGTTTGC
GCAGTGATGA CTGCCGACTG CCTCCCTGTG CTGTTTTGCA ATCGAGCGGG AACGGAAGTC
GCCGCCGCTC ATGCTGGCTG GCGTGGACTG TGCGCAGGCG TGCTGGAAGA GACAGTTTCC
TGTTTTGCTG ATAATCCGGA AAATATTCTC GCCTGGTTAG GGCCGGCAAT TGGTCCACGC
GCGTTCGAAG TGGGGGCGGA GGTTCGCGAG GCGTTTATGG CAGCAGACGC CAAAGCGAGT
ACAGCTTTCA TTCAGCATGG TGATAAGTAT CTGGCGGATA TTTATCTGCT TGCCCGGCAG
CGTCTGGCGA GCGTTGGTGT TGAACAAATT TTCGGCGGCG ACCGTTGTAC ATATACGGAA
AATGAGACTT TCTTCTCTTA TCGTCGCGAC AAGACCACCG GGCGTATGGC AAGTTTCATT
TGGCTGATAT AA
 
Protein sequence
MSKLIVPQWP LPKGVAACSS TRIGGVSLPP YDSLNLGAHC GDNPDHVEEN RKRLFAAGNL 
PSKPVWLEQV HGKDVLKLTG EPYASKRADA SYSNTPGTVC AVMTADCLPV LFCNRAGTEV
AAAHAGWRGL CAGVLEETVS CFADNPENIL AWLGPAIGPR AFEVGAEVRE AFMAADAKAS
TAFIQHGDKY LADIYLLARQ RLASVGVEQI FGGDRCTYTE NETFFSYRRD KTTGRMASFI
WLI