Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1085 |
Symbol | |
ID | 6065488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1175408 |
End bp | 1175758 |
Gene Length | 351 bp |
Protein Length | 116 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641600497 |
Product | translation inhibitor protein RaiA |
Protein accession | YP_001724079 |
Protein GI | 170019125 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0867426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000260622 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAATGA ACATTACCAG CAAACAAATG GAAATTACTC CGGCCATCCG CCAACATGTC GCAGACCGTC TCGCCAAACT GGAAAAATGG CAAACACATC TGATTAATCC ACATATCATT CTGTCCAAAG AGCCACAAGG GTTTGTTGCT GACGCCACAA TCAATACACC TAACGGCGTT CTGGTTGCCA GTGGTAAACA TGAAGATATG TACACCGCAA TTAACGAATT GATCAACAAG CTGGAACGGC AGCTCAATAA ACTGCAGCAC AAAGGCGAAG CACGTCGTGC CGCAACATCG GTGAAAGACG CCAACTTCGT CGAAGAAGTT GAAGAAGTTG AAGAAGAGTA G
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Protein sequence | MTMNITSKQM EITPAIRQHV ADRLAKLEKW QTHLINPHII LSKEPQGFVA DATINTPNGV LVASGKHEDM YTAINELINK LERQLNKLQH KGEARRAATS VKDANFVEEV EEVEEE
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