Gene EcolC_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_1083 
SymboltyrA 
ID6065511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1172835 
End bp1173956 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content52% 
IMG OID641600495 
Productbifunctional chorismate mutase/prephenate dehydrogenase 
Protein accessionYP_001724077 
Protein GI170019123 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase
[COG1605] Chorismate mutase 
TIGRFAM ID[TIGR01799] chorismate mutase domain of T-protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.676844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000106918 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGCTG AATTGACCGC ATTACGCGAT CAAATTGATG AAGTCGATAA AGCGCTGCTG 
AATTTATTAG CGAAGCGTCT GGAACTGGTT GCTGAAGTGG GCGAGGTGAA AAGCCGCTTT
GGACTGCCTA TTTATGTTCC GGAGCGCGAG GCATCTATGT TGGCCTCGCG GCGCGCAGAG
GCGGAAGCTC TGGGTGTACC GCCAGATCTG ATTGAGGATG TTTTGCGTCG GGTGATGCGT
GAATCTTACT CCAGTGAAAA CGACAAAGGA TTTAAAACAC TTTGTCCGTC ACTGCGTCCG
GTGGTTATCG TCGGCGGTGG CGGTCAGATG GGACGCCTGT TCGAGAAGAT GCTGACACTA
TCGGGTTATC AGGTGCGGAT TCTGGAGCAA CATGACTGGG ATCGAGCGGC TGATATTGTT
GCCGATGCCG GAATGGTGAT TGTTAGTGTG CCAATCCACG TTACTGAGCA AGTTATCGGC
AAATTACCGC CTTTACCGAA AGATTGTATT CTGGTTGATC TGGCATCAGT GAAAAATGGA
CCATTACAGG CCATGCTGGC GGCGCACGAT GGCCCGGTAC TGGGGTTACA CCCGATGTTC
GGCCCGGACA GCGGTAGCCT GGCAAAGCAA GTTGTGGTCT GGTGTGATGG ACGTAAGCCG
GAAGCATACC AATGGTTTCT GGAGCAAATT CAGGTCTGGG GCGCTCGGCT GCATCGTATT
AGCGCTGTCG AGCACGATCA GAATATGGCG TTTATTCAGG CTCTGCGCCA CTTTGCTACT
TTTGCTTATG GGCTGCATCT GGCAGAAGAA AATGTTCAGC TTGAGCAACT TCTGGCGCTC
TCTTCGCCGA TTTACCGCCT TGAGCTGGCG ATGGTCGGGC GACTGTTTGC TCAGGATCCG
CAGCTTTATG CCGACATTAT TATGTCGTCA GAGCGTAATC TGGCGTTAAT CAAACGTTAC
TATAAGCGTT TCGGCGAGGC GATTGAGTTG CTGGAGCAGG GCGATAAGCA GGCGTTTATT
GACAGTTTCC GCAAGGTGGA GCACTGGTTC GGCGATTACG CACAGCGTTT TCAGAGTGAA
AGCCGCGTGT TATTGCGTCA GGCGAATGAC AACCGCCAGT AA
 
Protein sequence
MVAELTALRD QIDEVDKALL NLLAKRLELV AEVGEVKSRF GLPIYVPERE ASMLASRRAE 
AEALGVPPDL IEDVLRRVMR ESYSSENDKG FKTLCPSLRP VVIVGGGGQM GRLFEKMLTL
SGYQVRILEQ HDWDRAADIV ADAGMVIVSV PIHVTEQVIG KLPPLPKDCI LVDLASVKNG
PLQAMLAAHD GPVLGLHPMF GPDSGSLAKQ VVVWCDGRKP EAYQWFLEQI QVWGARLHRI
SAVEHDQNMA FIQALRHFAT FAYGLHLAEE NVQLEQLLAL SSPIYRLELA MVGRLFAQDP
QLYADIIMSS ERNLALIKRY YKRFGEAIEL LEQGDKQAFI DSFRKVEHWF GDYAQRFQSE
SRVLLRQAND NRQ