| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1075 |
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| Symbol | rimM |
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| ID | 6065653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | + |
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| Start bp | 1166986 |
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| End bp | 1167534 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641600487 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001724069 |
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| Protein GI | 170019115 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.024634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0162863 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAAAC AACTCACCGC GCAAGCACCT GTTGATCCCA TCGTTTTGGG AAAAATGGGT
TCGTCTTACG GTATTCGTGG GTGGCTCAGA GTGTTTTCTT CCACCGAAGA CGCCGAAAGC
ATTTTTGACT ATCAGCCCTG GTTTATCCAG AAGGCGGGTC AGTGGCAGCA AGTCCAGCTG
GAAAGCTGGA AGCACCACAA TCAGGACATG ATCATCAAGC TGAAAGGCGT TGACGATCGT
GATGCGGCGA ACCTGCTGAC GAATTGTGAA ATTGTCGTGG ATTCATCGCA GCTGCCTCAG
CTTGAAGAGG GGGACTACTA CTGGAAAGAC CTGATGGGCT GCCAGGTAGT AACCACTGAA
GGCTACGATC TCGGTAAAGT CGTCGATATG ATGGAAACCG GATCTAATGA CGTTCTCGTC
ATTAAGGCAA ACCTGAAAGA TGCGTTTGGT ATCAAGGAAC GTCTCGTACC GTTCCTCGAT
GGGCAGGTTA TCAAGAAAGT CGATCTCACT ACTCGTTCAA TCGAAGTAGA TTGGGATCCT
GGTTTTTAA
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| Protein sequence | MSKQLTAQAP VDPIVLGKMG SSYGIRGWLR VFSSTEDAES IFDYQPWFIQ KAGQWQQVQL
ESWKHHNQDM IIKLKGVDDR DAANLLTNCE IVVDSSQLPQ LEEGDYYWKD LMGCQVVTTE
GYDLGKVVDM METGSNDVLV IKANLKDAFG IKERLVPFLD GQVIKKVDLT TRSIEVDWDP
GF
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