Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_1072 |
Symbol | |
ID | 6065767 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 1164263 |
End bp | 1165129 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641600484 |
Product | cytochrome c assembly protein |
Protein accession | YP_001724066 |
Protein GI | 170019112 |
COG category | [R] General function prediction only |
COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00835827 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0177644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACGGT TGGAGCAGCG TTCACCTGAC GCTATACTGC TTCTCTTTCT TATTGCTCAA ACTGTCGACA TCACTATGCC CGTTTTTGCT CTGCTCGCGC TTGTCGCCTA CTCCGTCAGT CTTGCGCTGA TTGTTCCCGG TCTGCTGCAA AAAAACGGCG GCTGGCGGCG CATGGCTATT ATTTCTGCGG TCATTGCGCT GGTCTGCCAC GCAATCGCTC TGGAAGCCCG CATCCTGCCC GACGGTGATA GCGGACAAAA CCTCAGCCTG CTGAACGTTG GTTCATTGGT CAGTTTGATG ATCTGTACGG TAATGACCAT TGTGGCTTCT CGCAATCGTG GCTGGTTGCT GCTACCCATT GTCTATGCCT TTGCGCTTAT CAACCTGGCG CTGGCGACCT TCATGCCCAA TGAATACATC ACCCATCTGG AAGCAACGCC TGGGATGCTG GTGCACATTG GCTTATCGCT CTTTTCCTAT GCCACGCTAA TTATCGCCGC CCTGTACGCG CTGCAACTGG CGTGGATTGA TTACCAACTG AAGAACAAGA AGCTGGCATT TAACCAGGAA ATGCCGCCAT TGATGAGTAT CGAGCGTAAA ATGTTCCACA TCACGCAGAT TGGCGTGGTG CTGCTAACGC TCACGCTTTG CACTGGCCTG TTCTACATGC ACAACCTATT TAGCATGGAA AATATCGACA AGGCTGTGCT CTCTATCGTG GCGTGGTTTG TCTATATTGT GCTGCTGTGG GGACATTACC ATGAAGGATG GCGTGGACGC CGCGTCGTCT GGTTTAACGT TGCGGGCGCG GTAATTCTGA CACTGGCCTA CTTCGGCAGC CGAATTGTCC AGCAGTTAAT CAGCTAA
|
Protein sequence | MQRLEQRSPD AILLLFLIAQ TVDITMPVFA LLALVAYSVS LALIVPGLLQ KNGGWRRMAI ISAVIALVCH AIALEARILP DGDSGQNLSL LNVGSLVSLM ICTVMTIVAS RNRGWLLLPI VYAFALINLA LATFMPNEYI THLEATPGML VHIGLSLFSY ATLIIAALYA LQLAWIDYQL KNKKLAFNQE MPPLMSIERK MFHITQIGVV LLTLTLCTGL FYMHNLFSME NIDKAVLSIV AWFVYIVLLW GHYHEGWRGR RVVWFNVAGA VILTLAYFGS RIVQQLIS
|
| |