| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_1030 |
|---|
| Symbol | nrdF |
|---|
| ID | 6066736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 1119709 |
|---|
| End bp | 1120668 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641600443 |
|---|
| Product | ribonucleotide-diphosphate reductase subunit beta |
|---|
| Protein accession | YP_001724026 |
|---|
| Protein GI | 170019072 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.489101 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT CACGTATCAG CGCCATCAAC TGGAACAAGA TATCTGACGA TAAAGATCTG
GAGGTGTGGA ATCGCCTGAC CAGCAATTTC TGGCTACCAG AAAAGGTGCC GCTGTCGAAC
GATATTCCTG CCTGGCAGAC ATTAACTGTC GTAGAACAAC AACTGACGAT GCGCGTTTTT
ACTGGCCTGA CGCTGCTCGA CACGCTGCAA AATGTTATCG GCGCGCCTTC TCTGATGCCC
GATGCACTCA CGCCTCATGA AGAAGCGGTA TTATCGAATA TCAGCTTTAT GGAAGCGGTT
CATGCCCGCT CTTACAGTTC GATTTTCTCG ACGCTATGCC AGACCAAAGA TGTCGATGCC
GCCTACGCCT GGAGTGAAGA AAACGCACCG TTGCAGCGAA AAGCTCAGAT TATTCAGCAA
CATTATCGCG GTGATGATCC GCTGAAAAAG AAAATCGCCA GTGTGTTTCT TGAATCTTTT
TTGTTCTATT CCGGTTTCTG GCTGCCGATG TATTTTTCCA GCCGCGGAAA GCTGACCAAT
ACCGCGGACC TGATCCGTCT GATTATCCGC GATGAAGCAG TCCACGGTTA CTACATAGGC
TATAAATATC AGAAAAACAT GGAAAAGATA TCTCTGGGAC AACGTGAAGA GTTGAAGAGT
TTCGCCTTCG ATTTGTTGCT GGAACTCTAC GACAACGAGT TGCAATACAC CGATGAGCTG
TACGCCGAAA CCCCGTGGGC TGACGATGTG AAAGCGTTTC TCTGTTACAA CGCCAATAAG
GCTTTGATGA ATCTGGGCTA CGAACCGTTA TTTCCCGCAG AAATGGCGGA AGTGAATCCG
GCAATCCTCG CCGCGCTTTC GCCGAATGCC GATGAAAATC ACGATTTCTT TTCCGGTTCA
GGCTCCTCTT ATGTGATGGG GAAAGCGGTT GAAACAGAAG ATGAAGACTG GAATTTCTGA
|
|---|
| Protein sequence | MKLSRISAIN WNKISDDKDL EVWNRLTSNF WLPEKVPLSN DIPAWQTLTV VEQQLTMRVF
TGLTLLDTLQ NVIGAPSLMP DALTPHEEAV LSNISFMEAV HARSYSSIFS TLCQTKDVDA
AYAWSEENAP LQRKAQIIQQ HYRGDDPLKK KIASVFLESF LFYSGFWLPM YFSSRGKLTN
TADLIRLIIR DEAVHGYYIG YKYQKNMEKI SLGQREELKS FAFDLLLELY DNELQYTDEL
YAETPWADDV KAFLCYNANK ALMNLGYEPL FPAEMAEVNP AILAALSPNA DENHDFFSGS
GSSYVMGKAV ETEDEDWNF
|
|---|
| |