Gene EcolC_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0990 
Symbol 
ID6067758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp1076650 
End bp1077573 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content58% 
IMG OID641600398 
Productrespiratory-chain NADH dehydrogenase subunit 1 
Protein accessionYP_001723986 
Protein GI170019032 
COG category[C] Energy production and conversion 
COG ID[COG0650] Formate hydrogenlyase subunit 4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0456069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTT TATATCCGTT AATTCAGGCG CTGGTGTTAT TTGCCGTTGC GCCGCTGCTC 
TCCGGTATAA CCCGCGTGGC GCGCGCCCGC TTGCATAACC GTCGCGGGCC GGGCGTGTTG
CAGGAGTATC GCGACATTAT CAAACTGCTG GGGCGTCAGA GCGTCGGCCC GGATGCCTCC
GGCTGGGTGT TCCGCCTGAC GCCGTATGTG ATGGTGGGCG TCATGCTGAC TATCGCTACT
GCGCTGCCGG TGGTGACCGT CGGTTCTCCG CTGCCGCAAC TGGGTGATTT GATCACCTTA
CTGTATCTCT TTGCCATCGC GCGTTTCTTC TTTGCCATTT CTGGTCTGGA TACCGGTAGC
CCGTTTACCG CTATCGGCGC GAGCCGTGAA GCGATGCTTG GCGTGCTGGT CGAACCGATG
CTGCTGCTTG GTCTGTGGGT TGCCGCACAG GTTGCCGGTT CCACCAACAT CAGCAACATC
ACCGACACCG TTTATCACTG GCCGCTGAGC CAGAGCATCC CGCTGGTACT GGCGCTTTGT
GCCTGTGCGT TCGCCACCTT TATCGAAATG GGCAAACTGC CGTTCGACCT GGCGGAAGCC
GAGCAGGAGC TGCAGGAAGG CCCGCTCTCT GAATACAGCG GCAGCGGCTT TGGCGTCATG
AAATGGGGTA TCAGCCTGAA ACAGCTGGTG GTGTTGCAGA TGTTCGTCGG GGTGTTTATT
CCGTGGGGAC AAATGGAAAC CTTCACCGCC GGTGGACTGC TGCTGGCGCT GGTGATTGCC
ATCGTAAAAC TGGTGGTCGG CGTCCTGGTT ATCGCGCTGT TCGAAAACAG CATGGCCCGT
CTGCGTCTTG ATATTACTCC GCGCATTACC TGGGCTGGGT TTGGCTTTGC ATTTTTAGCG
TTCGTCTCCT TGCTGGCGGC GTGA
 
Protein sequence
MSVLYPLIQA LVLFAVAPLL SGITRVARAR LHNRRGPGVL QEYRDIIKLL GRQSVGPDAS 
GWVFRLTPYV MVGVMLTIAT ALPVVTVGSP LPQLGDLITL LYLFAIARFF FAISGLDTGS
PFTAIGASRE AMLGVLVEPM LLLGLWVAAQ VAGSTNISNI TDTVYHWPLS QSIPLVLALC
ACAFATFIEM GKLPFDLAEA EQELQEGPLS EYSGSGFGVM KWGISLKQLV VLQMFVGVFI
PWGQMETFTA GGLLLALVIA IVKLVVGVLV IALFENSMAR LRLDITPRIT WAGFGFAFLA
FVSLLAA