Gene EcolC_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0915 
Symbol 
ID6068620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp989762 
End bp991129 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content54% 
IMG OID641600322 
ProductL-serine dehydratase 1 
Protein accessionYP_001723911 
Protein GI170018957 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCG TATTCGATAT TTTCAAAATC GGCATTGGCC CTTCCAGTTC TCATACCGTT 
GGACCAATGA AAGCGGGTAA ACAATTTACC GACGATCTGA TTGCCCATAA TCTGCTTAAA
GACGTGACCC GCGTGGTGGT TGACGTGTAC GGCTCGCTCT CTCTGACCGG TAAAGGCCAC
CACACTGATA TCGCCATTAT TATGGGCCTG GCGGGTAACC TGCCGGATAC CGTGGATATC
GATTCCATCC CTGGTTTTAT TCAGGATGTG AATACTCATG GTCGCCTGAT GCTGGCAAAC
GGTCAGCATG AAGTGGAGTT CCCGGTTGAT CAGTGCATGA ACTTCCATGC AGACAACCTT
TCTCTGCATG AAAACGGTAT GCGCATTACC GCGCTGGCGG GCGATAAAGT CGTTTACAGC
CAGACTTACT ACTCTATTGG CGGTGGCTTT ATCGTTGATG AAGAGCATTT TGGCCAGCAG
AATAGCGCAC CGGTTGAAGT TCCTTATCCG TACAGTTCAG CAGCCGATCT GCAAAAACAT
TGTCAGGAAA CCGGGCTGTC ACTCTCTGGC CTGATGATGA AAAATGAGCT GGCGCTGCAC
AGCAAAGAAG AGCTGGAACA GCACCTGGCG AACGTATGGG AAGTCATGCG TGGCGGTATT
GAGCGCGGTA TTTCCACCGA AGGCGTGTTG CCTGGCAAAC TGCGCGTTCC ACGCCGTGCT
GCGGCACTAC GCCGGATGCT GGTCAGCCAG GATAAAACCA CCACTGACCC GATGGCGGTT
GTTGACTGGA TCAACATGTT TGCACTGGCA GTGAACGAAG AGAACGCTGC TGGCGGACGC
GTGGTGACTG CGCCGACTAA CGGTGCGTGC GGGATTATCC CGGCAGTGCT GGCGTACTAC
GACAAGTTTA TCCGCGAAGT GAACGCTAAC TCACTGGCTC GTTACCTGCT GGTAGCCAGT
GCCATTGGTT CTCTTTATAA GATGAACGCG TCAATTTCTG GTGCTGAAGT CGGCTGCCAG
GGTGAAGTTG GTGTGGCGTG CTCAATGGCG GCGGCTGGTC TGGCAGAGCT GTTAGGTGCA
AGCCCGGCGC AGGTGTGCAT CGCGGCGGAA ATCGCCATGG AGCACAACCT CGGTCTGACG
TGTGACCCGG TCGCCGGACA GGTCCAGGTG CCATGCATCG AGCGTAACGC CATTGCGGCA
GTAAAAGCGG TGAACGCCGC ACGTATGGCG CTACGCCGTA CCAGCGAGCC GCGCGTCTGC
CTCGATAAAG TTATCGAAAC CATGTACGAA ACAGGTAAAG ATATGAACGC CAAGTACCGC
GAAACCTCTC GCGGCGGCCT GGCAATGAAG ATCGTTGCCT GCGATTAA
 
Protein sequence
MISVFDIFKI GIGPSSSHTV GPMKAGKQFT DDLIAHNLLK DVTRVVVDVY GSLSLTGKGH 
HTDIAIIMGL AGNLPDTVDI DSIPGFIQDV NTHGRLMLAN GQHEVEFPVD QCMNFHADNL
SLHENGMRIT ALAGDKVVYS QTYYSIGGGF IVDEEHFGQQ NSAPVEVPYP YSSAADLQKH
CQETGLSLSG LMMKNELALH SKEELEQHLA NVWEVMRGGI ERGISTEGVL PGKLRVPRRA
AALRRMLVSQ DKTTTDPMAV VDWINMFALA VNEENAAGGR VVTAPTNGAC GIIPAVLAYY
DKFIREVNAN SLARYLLVAS AIGSLYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGA
SPAQVCIAAE IAMEHNLGLT CDPVAGQVQV PCIERNAIAA VKAVNAARMA LRRTSEPRVC
LDKVIETMYE TGKDMNAKYR ETSRGGLAMK IVACD