Gene EcolC_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0884 
Symbol 
ID6064717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp950353 
End bp951042 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content54% 
IMG OID641600287 
ProductDNA mismatch repair protein 
Protein accessionYP_001723880 
Protein GI170018926 
COG category[L] Replication, recombination and repair 
COG ID[COG3066] DNA mismatch repair protein 
TIGRFAM ID[TIGR02248] DNA mismatch repair endonuclease MutH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000023918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAC CTCGCCCACT GCTCTCTCCT CCCGAAACTG AAGAACAGTT GTTAGCGCAA 
GCACAGCAAC TTTCTGGTTA TACATTGGGA GAACTGGCGG CACTTGCCGG GCTGGTTACG
CCAGAGAATT TAAAACGCGA TAAAGGCTGG ATTGGCGTGT TACTGGAGAT CTGGCTAGGT
GCCAGCGCAG GGAGTAAACC TGAGCAAGAT TTTGCTGCTC TGGGCGTGGA ACTTAAAACT
ATCCCTGTGG ATAGTCTTGG TCGTCCGCTG GAAACAACAT TCGTTTGTGT TGCCCCGTTA
ACGGGCAATA GCGGGGTGAC CTGGGAAACC AGCCACGTGC GCCACAAACT CAAACGCGTA
CTGTGGATAC CGGTTGAAGG CGAGCGCAGC ATCCCGCTGG CGCAGCGTCG CGTTGGATCA
CCGTTGCTGT GGAGCCCGAA TGAAGAGGAA GACCGACAGC TACGCGAAGA CTGGGAAGAA
TTAATGGATA TGATTGTTCT CGGTCAGGTT GAGCGGATTA CCGCTCGTCA CGGGGAATAT
TTACAGATAC GACCGAAAGC AGCGAATGCG AAAGCGCTTA CCGAAGCCAT TGGTGCCCGG
GGCGAACGGA TTCTGACGCT GCCACGCGGC TTTTATTTGA AGAAGAATTT CACCAGTGCG
CTACTGGCCC GTCATTTTCT GATCCAGTAG
 
Protein sequence
MSQPRPLLSP PETEEQLLAQ AQQLSGYTLG ELAALAGLVT PENLKRDKGW IGVLLEIWLG 
ASAGSKPEQD FAALGVELKT IPVDSLGRPL ETTFVCVAPL TGNSGVTWET SHVRHKLKRV
LWIPVEGERS IPLAQRRVGS PLLWSPNEEE DRQLREDWEE LMDMIVLGQV ERITARHGEY
LQIRPKAANA KALTEAIGAR GERILTLPRG FYLKKNFTSA LLARHFLIQ