| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0554 |
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| Symbol | |
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| ID | 6064985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli ATCC 8739 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010468 |
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| Strand | - |
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| Start bp | 597029 |
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| End bp | 599545 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641599961 |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | YP_001723558 |
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| Protein GI | 170018604 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0981109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAAC GACACCACCA GGGACATAAA CGCACACCGA AACAGTTGGC GCTCATTATC
AAACGCTGTT TGCCGATGGT GCTCACTGGC AGCGGCATGC TTTGCACTAC CGCTAACGCC
GAAGAGTATT ATTTCGACCC CATTATGCTG GAAACCACAA AAAGTGGTAT GCAAACAACC
GATCTGTCAC GATTTTCAAA GAAATACGCA CAACTACCAG GAACTTATCA GGTTGATATC
TGGCTGAATA AAAAGAAGGT TTCACAGAAA AAAATTACAT TTACCGCCAA TGCAGAGCAA
CTTCTGCAGC CACAGTTTAC GGTAGAACAA CTACGTGAGC TGGGTATTAA GGTGGATGAA
ATCCCGGCGC TGGCTGAAAA AGATGACGAT AGCGTGATCA ACTCGCTTGA ACAAATCATT
CCCGGTACAG CTGCTGAATT TGATTTCAAT CATCAGCGAC TTAATTTGAG CATTCCCCAA
ATTGCACTGT ACCGTGATGC AAGAGGTTAC GTCTCCCCTT CTCGTTGGGA CGATGGTATA
CCAACGCTGT TTACCAACTA CTCGTTTACA GGTTCTGATA ACCGTTACCG CCAGGGCAAT
CGTAGCCAAC GACAGTACCT GAATATGCAA AATGGTGCTA ATTTTGGCCC CTGGCGATTA
CGTAACTATT CTACGTGGAC ACGCAACGAT CAGGCGTCAA GCTGGAACAC TATCAGTAGT
TATTTACAAC GTGATATCAA GGCGTTGAAG TCTCAGTTGC TTCTGGGAGA AAGCGCCACC
AGCGGCAGTA TTTTTTCCAG CTACACCTTT ACTGGCGTGC AACTCGCTTC CGACGATAAT
ATGTTGCCAA ACAGCCAGCG CGGATTTGCC CCAACGGTAC GCGGTATCGC AAACAGTAGT
GCAATCGTGA CTATCAGGCA AAATGGTTAT GTGATCTATC AAAGCAACGT GCCAGCGGGT
GCCTTTGAAA TTAACGATCT CTACCCCTCT TCCAACAGCG GCGATTTAGA AGTCACGATT
GAAGAAAGTG ACGGTACACA ACGTCGCTTT ATCCAGCCTT ATTCTTCATT ACCCATGATG
CAGCGACCTG GGCATCTAAA GTATAGCGCG ACCGCTGGAC GCTATCGCGC TGATGCAAAC
AGTGATAGCA AGGAACCCGA ATTTGCTGAA GCCACGGCAA TATATGGTTT GAATAATACT
TTTACGCTGT ATGGCGGCCT GCTCGGTTCT GAAGATTATT ATGCGCTGGG GATCGGTATC
GGCGGCACAC TTGGCGCACT GGGCGCGTTG TCGATGGATA TCAACAGAGC TGACACCCAA
TTCGATAACC AGCACTCTTT TCATGGCTAT CAATGGCGTA CGCAGTACAT CAAAGATATC
CCGGAAACCA ACACCAATAT CGCTGTCAGC TACTATCGCT ATACCAACGA TGGCTATTTT
AGTTTTGATG AAGCCAATAC CCGTAATTGG AACTATAACA GTCGCCAAAA AAGTGAAATT
CAATTCAACA TCAGCCAGAC AATATTTGAT GGGGTAAGTC TGTATGCCTC CGGTTCGCAG
CAAGACTATT GGGGCAATAA CGATAAAAAC AGGAATATCT CTGTTGGGGT TTCCGGCCAG
CAATGGGGAG TTGGTTACAG CCTGAATTAT CAATACAGCC GCTACACTGA TCAAAATAAT
GACCGCGCAC TCTCTTTGAA TCTCAGTATT CCGTTAGAAC GCTGGTTACC GCGTAGCCGG
GTTTCCTATC AGATGACCAG CCAGAAAGAT CGCCCAACCC AACATGAAAT GCGTCTTGAT
GGTTCACTGC TGGATGATGG TCGCCTGAGC TATAGCCTGG AACAAAGTCT GGATGACGAT
AACAACCATA ACAGTAGCGT GAACGCCAGT TACCGTTCAC CTTATGGAAC CTTCAGTGCC
GGATACAGTT ACGGTAATGA CAGTAGCCAA TACAATTACG GCGTTACCGG CGGCGTGGTT
ATCCATCCTC ATGGTGTGAC GCTCTCGCAA TATCTGGGCA ACGCTTTTGC GCTTATTGAT
GCTAACGGGG CATCTGGCGT GAGGATACAA AACTATCCGG GGATTGCTAC TGATCCCTTT
GGCTATGCAG TGGTTCCTTA TCTCACGACT TATCAGGAAA ACCGTCTCTC GGTAGATACT
ACGCAGCTGC CCGATAACGT CGATCTTGAG CAAACAACAC AGTTTGTGGT GCCCAACAGA
GGTGCAATGG TAGCGGCGCG TTTCAACGCC AATATCGGTT ATCGCGTACT TGTTACAGTC
AGCGATCGCA ACGGTAAACC GTTGCCCTTT GGCGCTCTTG CCAGCAACGA TGAGACGGGG
CAACAAAGTA TCGTCGATGA GGGCGGCATA CTATATCTCT CTGGGATATC GAGTAAATCA
CAAAGCTGGA CTGTACGCTG GGGAAATCAG GCAGATCAAC AATGTCAGTT TGCTTTTAGT
ACACCGGATT CAGAACCAAC AACCTCTGTA TTACAAGGCA CGGCGCAGTG CCATTAA
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| Protein sequence | MPQRHHQGHK RTPKQLALII KRCLPMVLTG SGMLCTTANA EEYYFDPIML ETTKSGMQTT
DLSRFSKKYA QLPGTYQVDI WLNKKKVSQK KITFTANAEQ LLQPQFTVEQ LRELGIKVDE
IPALAEKDDD SVINSLEQII PGTAAEFDFN HQRLNLSIPQ IALYRDARGY VSPSRWDDGI
PTLFTNYSFT GSDNRYRQGN RSQRQYLNMQ NGANFGPWRL RNYSTWTRND QASSWNTISS
YLQRDIKALK SQLLLGESAT SGSIFSSYTF TGVQLASDDN MLPNSQRGFA PTVRGIANSS
AIVTIRQNGY VIYQSNVPAG AFEINDLYPS SNSGDLEVTI EESDGTQRRF IQPYSSLPMM
QRPGHLKYSA TAGRYRADAN SDSKEPEFAE ATAIYGLNNT FTLYGGLLGS EDYYALGIGI
GGTLGALGAL SMDINRADTQ FDNQHSFHGY QWRTQYIKDI PETNTNIAVS YYRYTNDGYF
SFDEANTRNW NYNSRQKSEI QFNISQTIFD GVSLYASGSQ QDYWGNNDKN RNISVGVSGQ
QWGVGYSLNY QYSRYTDQNN DRALSLNLSI PLERWLPRSR VSYQMTSQKD RPTQHEMRLD
GSLLDDGRLS YSLEQSLDDD NNHNSSVNAS YRSPYGTFSA GYSYGNDSSQ YNYGVTGGVV
IHPHGVTLSQ YLGNAFALID ANGASGVRIQ NYPGIATDPF GYAVVPYLTT YQENRLSVDT
TQLPDNVDLE QTTQFVVPNR GAMVAARFNA NIGYRVLVTV SDRNGKPLPF GALASNDETG
QQSIVDEGGI LYLSGISSKS QSWTVRWGNQ ADQQCQFAFS TPDSEPTTSV LQGTAQCH
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