Gene EcolC_0517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0517 
SymbolobgE 
ID6068686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp556606 
End bp557778 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content53% 
IMG OID641599922 
ProductGTPase ObgE 
Protein accessionYP_001723521 
Protein GI170018567 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000402809 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0042534 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTTG TTGATGAAGC ATCGATTCTG GTCGTTGCAG GTGATGGCGG TAATGGTTGC 
GTGAGCTTCC GCCGCGAAAA GTATATTCCG AAAGGCGGCC CGGATGGCGG CGACGGTGGT
GATGGTGGTG ACGTATGGAT GGAAGCCGAC GAAAACCTGA ACACGCTTAT CGATTATCGT
TTTGAAAAAT CTTTCCGTGC AGAGCGCGGT CAGAACGGCG CAAGCCGCGA TTGTACCGGT
AAGCGCGGTA AAGACGTGAC GATTAAAGTG CCGGTAGGTA CGCGTGTAAT CGACCAGGGT
ACTGGTGAAA CCATGGGCGA TATGACTAAA CACGGTCAGC GTCTGCTGGT TGCTAAGGGC
GGCTGGCACG GTCTGGGCAA TACCCGTTTC AAATCGTCCG TTAACCGTAC ACCACGGCAG
AAAACCAACG GTACGCCGGG TGATAAGCGT GAGCTGCTGC TGGAGCTGAT GCTGCTGGCT
GACGTCGGTA TGTTGGGGAT GCCAAACGCG GGGAAATCGA CCTTTATTCG CGCGGTATCG
GCGGCTAAAC CGAAAGTGGC GGATTATCCG TTTACCACTC TGGTGCCAAG TCTGGGTGTG
GTACGAATGG ACAACGAAAA GAGCTTCGTT GTTGCCGATA TTCCAGGACT GATTGAAGGC
GCTGCGGAAG GCGCAGGTCT GGGTATCCGC TTCCTGAAGC ACCTGGAACG TTGCCGCGTC
CTGTTGCACC TCATCGATAT CGATCCGATT GACGGCACCG ATCCGGTTGA AAACGCGCGT
ATTATTATCA GCGAGCTGGA AAAATACAGC CAGGATCTGG CGGCGAAACC GCGTTGGTTA
GTGTTCAACA AGATCGATCT GCTGGATAAG GCAGAAGCCG AAGAGAAAGC GAAAGCGATC
GCTGAGGCGC TGGGCTGGGA AGATAAATAT TATCTGATCT CTGCGGCGAG CGGACTGGGC
GTGAAAGATC TCTGCTGGGA TGTGATGACC TTTATCATTG AAAACCCGGT CGTGCAGGCT
GAAGAAGCGA AACAGCCAGA GAAAGTCGAA TTCATGTGGG ATGATTATCA TCGCCAGCAG
CTTGAAGAGA TTGCTGAAGA GGATGATGAG GACTGGGATG ACGACTGGGA CGAAGACGAC
GAAGAAGGCG TTGAGTTCAT TTACAAGCGT TAA
 
Protein sequence
MKFVDEASIL VVAGDGGNGC VSFRREKYIP KGGPDGGDGG DGGDVWMEAD ENLNTLIDYR 
FEKSFRAERG QNGASRDCTG KRGKDVTIKV PVGTRVIDQG TGETMGDMTK HGQRLLVAKG
GWHGLGNTRF KSSVNRTPRQ KTNGTPGDKR ELLLELMLLA DVGMLGMPNA GKSTFIRAVS
AAKPKVADYP FTTLVPSLGV VRMDNEKSFV VADIPGLIEG AAEGAGLGIR FLKHLERCRV
LLHLIDIDPI DGTDPVENAR IIISELEKYS QDLAAKPRWL VFNKIDLLDK AEAEEKAKAI
AEALGWEDKY YLISAASGLG VKDLCWDVMT FIIENPVVQA EEAKQPEKVE FMWDDYHRQQ
LEEIAEEDDE DWDDDWDEDD EEGVEFIYKR