Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0378 |
Symbol | |
ID | 6066623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 428710 |
End bp | 429387 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641599777 |
Product | peptidase A24A prepilin type IV |
Protein accession | YP_001723383 |
Protein GI | 170018429 |
COG category | [N] Cell motility [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.735955 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATGC TACTGCCGCT CTTCATTCTG GTTGGTTTTA TTGCAGGTTA TTTTGTTAAT GCCATCGCCT ATCACCTCTC GCCGTTGGAG GATAAAACGG CGTTAACGTT TCGCCAGGTA TTGGTTCATT TCAGGCAAAA AAAATATGCC TGGCATGATA CAGTGCCCCT GATACTTTGT GTTGCTGCTG CTATCGCCTG CGCCCTGGCA CCTTTCACGC CCATCGTGAC TGGCGCACTC TTTCTCTATT TCTGTTTCGT ACTCACGCTC AGTGTTATTG ATTTTCGCAC TCAGCTCCTG CCCGACAAAC TCACCTTACC GCTGCTCTGG CTTGGCTTGG TATTTAATGC GCAGTATGGA TTAATTGATT TACATGATGC GGTTTACGGC GCGGTAGCGG GCTATGGGGT GCTGTGGTGT GTTTACTGGG GCGTCTGGTT AGTTTGTCAC AAAGAGGGAT TGGGCTACGG TGATTTCAAG CTACTGGCCG CTGCAGGCGC ATGGTGTGGC TGGCAAACGT TGCCAATGAT ACTGCTGATT GCCTCGCTGG GTGGCATTGG TTACGCCATC GTTTCACAAC TTCTGCAACG CCGGACTATA ACCACTATCG CATTCGGCCC GTGGCTTGCG CTCGGCAGCA TGATAAACCT GGGGTATCTG GCCTGGATCT CTTATTAA
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Protein sequence | MTMLLPLFIL VGFIAGYFVN AIAYHLSPLE DKTALTFRQV LVHFRQKKYA WHDTVPLILC VAAAIACALA PFTPIVTGAL FLYFCFVLTL SVIDFRTQLL PDKLTLPLLW LGLVFNAQYG LIDLHDAVYG AVAGYGVLWC VYWGVWLVCH KEGLGYGDFK LLAAAGAWCG WQTLPMILLI ASLGGIGYAI VSQLLQRRTI TTIAFGPWLA LGSMINLGYL AWISY
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