Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0308 |
Symbol | ompR |
ID | 6065427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | + |
Start bp | 358343 |
End bp | 359062 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641599707 |
Product | osmolarity response regulator |
Protein accession | YP_001723313 |
Protein GI | 170018359 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0516186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAGA ACTACAAGAT TCTGGTGGTC GATGACGACA TGCGCCTGCG TGCGCTGCTG GAACGTTATC TCACCGAACA AGGCTTCCAG GTTCGAAGCG TCGCTAATGC AGAACAGATG GATCGCCTGC TGACTCGTGA ATCTTTCCAT CTTATGGTAC TGGATTTAAT GTTACCTGGT GAAGATGGCT TGTCGATTTG CCGACGTCTT CGTAGTCAGA GCAACCCGAT GCCGATCATT ATGGTGACGG CGAAAGGGGA AGAAGTGGAC CGTATCGTAG GCCTGGAGAT TGGCGCTGAC GACTACATTC CAAAACCGTT TAACCCGCGT GAACTGCTGG CCCGTATCCG TGCGGTGCTG CGTCGTCAGG CGAACGAACT GCCAGGCGCA CCGTCACAGG AAGAGGCGGT AATTGCTTTC GGTAAGTTCA AACTTAACCT CGGTACGCGC GAAATGTTCC GCGAAGACGA GCCGATGCCG CTCACCAGCG GTGAGTTTGC GGTACTGAAG GCACTGGTCA GCCATCCGCG TGAGCCGCTC TCCCGCGATA AGCTGATGAA CCTTGCCCGT GGTCGTGAAT ATTCCGCAAT GGAACGCTCC ATCGACGTGC AGATTTCGCG TCTGCGCCGC ATGGTGGAAG AAGATCCAGC GCATCCGCGT TACATTCAGA CCGTCTGGGG TCTGGGCTAC GTCTTTGTAC CGGACGGCTC TAAAGCATGA
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Protein sequence | MQENYKILVV DDDMRLRALL ERYLTEQGFQ VRSVANAEQM DRLLTRESFH LMVLDLMLPG EDGLSICRRL RSQSNPMPII MVTAKGEEVD RIVGLEIGAD DYIPKPFNPR ELLARIRAVL RRQANELPGA PSQEEAVIAF GKFKLNLGTR EMFREDEPMP LTSGEFAVLK ALVSHPREPL SRDKLMNLAR GREYSAMERS IDVQISRLRR MVEEDPAHPR YIQTVWGLGY VFVPDGSKA
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