Gene EcolC_0221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0221 
Symbol 
ID6067060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp252912 
End bp253346 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content49% 
IMG OID641599622 
ProductUspA domain-containing protein 
Protein accessionYP_001723229 
Protein GI170018275 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTATA AACACATTCT CATCGCGGTC GATCTCTCCC CGGAAAGCAA AGTTCTGGTA 
GAGAAAGCAG TCTCTATGGC TCGCCCCTAC AATGCGAAAG TTTCTCTGAT CCACGTAGAT
GTAAACTACT CTGACCTATA CACCGGGCTT ATTGATGTGA ATCTGGGTGA TATGCAGAAA
CGCATCTCAG AAGAGACACA TCATGCGCTG ACCGAGCTTT CCACTAATGC AGGCTACCCA
ATCACTGAAA CCCTGAGCGG CAGCGGCGAC CTGGGCCAAG TTCTGGTCGA TGCAATCAAG
AAATACGATA TGGATCTGGT GGTTTGTGGT CACCACCAGG ACTTCTGGAG CAAACTGATG
TCTTCCGCAC GTCAGCTGAT CAACACCGTT CACGTTGATA TGCTGATTGT TCCGCTGCGC
GACGAAGAAG AATAA
 
Protein sequence
MAYKHILIAV DLSPESKVLV EKAVSMARPY NAKVSLIHVD VNYSDLYTGL IDVNLGDMQK 
RISEETHHAL TELSTNAGYP ITETLSGSGD LGQVLVDAIK KYDMDLVVCG HHQDFWSKLM
SSARQLINTV HVDMLIVPLR DEEE