Gene EcolC_0164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0164 
Symbol 
ID6068253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp177448 
End bp178107 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content58% 
IMG OID641599564 
Productputative outer membrane lipoprotein 
Protein accessionYP_001723173 
Protein GI170018219 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC GTGTTTATCT TATTGCCGCC GTAGTGAGTG GCGCTCTGGC GGTATCTGGC 
TGCACAACTA ACCCTTACAC CGGCGAACGC GAAGCAGGTA AATCTGCTAT CGGCGCAGGT
CTGGGCTCTC TCGTGGGCGC GGGTATTGGT GCGCTCTCTT CTTCGAAGAA AGATCGCGGT
AAAGGCGCGC TGATTGGCGC AGCAGCAGGC GCAGCTCTGG GCGGCGGCGT TGGTTATTAC
ATGGATGTGC AGGAAGCGAA GCTGCGCGAC AAAATGCGCG GCACTGGTGT TAGCGTAACC
CGCAGCGGGG ATAACATTAT CCTCAATATG CCGAACAATG TGACCTTCGA CAGCAGCAGC
GCGACTCTGA AACCGGCAGG CGCTAACACC CTGACCGGCG TGGCAATGGT GCTGAAAGAG
TATCCGAAAA CGGCGGTTAA CGTGATTGGT TATACCGACA GCACGGGGGG TCACGACCTG
AACATGCGTC TCTCCCAGCA GCGTGCGGAT TCCGTTGCCA GCGCGTTGAT CACCCAGGGC
GTGGACGCCA GCCGCATCCG TACTCAGGGC CTTGGCCCGG CTAACCCAAT CGCCAGCAAC
AGCACCGCAG AAGGTAAGGC GCAAAACCGC CGTGTAGAAA TTACCTTAAG CCCGCTGTAA
 
Protein sequence
MKKRVYLIAA VVSGALAVSG CTTNPYTGER EAGKSAIGAG LGSLVGAGIG ALSSSKKDRG 
KGALIGAAAG AALGGGVGYY MDVQEAKLRD KMRGTGVSVT RSGDNIILNM PNNVTFDSSS
ATLKPAGANT LTGVAMVLKE YPKTAVNVIG YTDSTGGHDL NMRLSQQRAD SVASALITQG
VDASRIRTQG LGPANPIASN STAEGKAQNR RVEITLSPL