Gene EcolC_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0149 
Symbol 
ID6068285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp164061 
End bp165383 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content51% 
IMG OID641599549 
Productxylose isomerase 
Protein accessionYP_001723158 
Protein GI170018204 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2115] Xylose isomerase 
TIGRFAM ID[TIGR02630] xylose isomerase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCT ATTTTGACCA GCTCGATCGC GTTCGTTATG AAGGCTCAAA ATCCTCAAAC 
CCGTTAGCAT TCCGTCACTA CAATCCCGAC GAACTGGTGT TGGGTAAGCG TATGGAAGAG
CACTTGCGTT TTGCCGCCTG CTACTGGCAC ACCTTCTGCT GGAACGGGGC GGATATGTTT
GGTGTGGGGG CGTTTAATCG TCCGTGGCAG CAGCCTGGTG AGGCACTGGC GTTGGCGAAG
CGTAAAGCAG ATGTCGCATT TGAGTTTTTC CACAAGTTAC ATGTGCCATT TTATTGCTTC
CACGATGTGG ATGTTTCCCC TGAGGGCGCG TCGTTAAAAG AGTACATCAA TAATTTTGCG
CAAATGGTTG ATGTCCTGGC AGGCAAGCAA GAAGAGAGCG GCGTGAAGCT GCTGTGGGGA
ACCGCCAACT GCTTTACAAA CCCTCGCTAC GGCGCGGGTG CGGCGACGAA CCCAGATCCT
GAAGTCTTCA GCTGGGCGGC AACGCAAGTT GTTACAGCGA TGGAAGCAAC CCATAAATTG
GGCGGTGAAA ACTATGTCCT GTGGGGCGGT CGTGAAGGTT ACGAAACGCT GTTAAATACC
GACTTGCGTC AGGAGCGTGA ACAACTGGGC CGCTTTATGC AGATGGTGGT TGAGCATAAA
CATAAAATCG GTTTCCAGGG CACGTTGCTT ATCGAACCGA AACCGCAAGA ACCGACCAAA
CATCAATATG ATTACGATGC CGCGACGGTC TATGGCTTCC TGAAACAGTT TGGTCTGGAA
AAAGAGATTA AACTGAACAT TGAAGCTAAC CACGCGACGC TGGCAGGTCA CTCTTTCCAT
CATGAAATAG CCACCGCCAT TGCGCTTGGC CTGTTCGGTT CTGTCGACGC CAACCGTGGC
GATGCGCAAC TGGGCTGGGA CACCGACCAG TTCCCGAACA GTGTGGAAGA GAATGCGCTG
GTGATGTATG AAATTCTCAA AGCAGGCGGT TTCACCACCG GTGGTCTGAA CTTCGATGCC
AAAGTACGTC GTCAAAGTAC TGATAAATAT GATCTGTTTT ACGGTCATAT CGGCGCGATG
GATACGATGG CACTGGCGCT GAAAATTGCA GCGCGCATGA TTGAAGATGG CGAGCTGGAT
AAACGCATCG CGCAGCGTTA TTCCGGCTGG AATAGCGAAT TGGGCCAGCA AATCCTGAAA
GGCCAAATGT CACTGGCAGA TTTAGCCAAA TATGCTCAGG AACATAATTT GTCTCCGGTG
CATCAGAGTG GTCGCCAGGA GCAACTGGAA AATCTGGTAA ATCATTATCT GTTCGACAAA
TAA
 
Protein sequence
MQAYFDQLDR VRYEGSKSSN PLAFRHYNPD ELVLGKRMEE HLRFAACYWH TFCWNGADMF 
GVGAFNRPWQ QPGEALALAK RKADVAFEFF HKLHVPFYCF HDVDVSPEGA SLKEYINNFA
QMVDVLAGKQ EESGVKLLWG TANCFTNPRY GAGAATNPDP EVFSWAATQV VTAMEATHKL
GGENYVLWGG REGYETLLNT DLRQEREQLG RFMQMVVEHK HKIGFQGTLL IEPKPQEPTK
HQYDYDAATV YGFLKQFGLE KEIKLNIEAN HATLAGHSFH HEIATAIALG LFGSVDANRG
DAQLGWDTDQ FPNSVEENAL VMYEILKAGG FTTGGLNFDA KVRRQSTDKY DLFYGHIGAM
DTMALALKIA ARMIEDGELD KRIAQRYSGW NSELGQQILK GQMSLADLAK YAQEHNLSPV
HQSGRQEQLE NLVNHYLFDK