Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcolC_0135 |
Symbol | |
ID | 6068360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli ATCC 8739 |
Kingdom | Bacteria |
Replicon accession | NC_010468 |
Strand | - |
Start bp | 147745 |
End bp | 148731 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641599536 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_001723145 |
Protein GI | 170018191 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTAC GCTCTGTAAC CTACGCATTA TTCATTGCTG GCCTGGCTGC ATTCAGCACA TCTTCTCTGG CGGCACAATC TTTACGTTTC GGTTATGAAA CATCACAAAC CGACTCGCAA CATATTGCGG CGAAAAAATT CAATGATTTA TTGCAGGAGA GAACCAAAGG CGAGCTGAAA TTAAAACTGT TCCCGGACAG CACTCTCGGT AACGCGCAGG CGATGATCAG CGGCGTACGT GGCGGCACCA TCGATATGGA AATGTCCGGC TCGAATAACT TTGCCGGGTT ATCACCAGTG ATGAACTTGC TTGATGTCCC TTTCCTGTTC CGCGATACCG CTCACGCGCA TAAAACGCTC GACGGCAAAG TCGGTGATGA TCTGAAAGCC TCACTTGAAG GTAAAGGACT GAAAGTACTG GCCTACTGGG AAAACGGCTG GCGCGATGTC ACCAACTCGC GCGCACCGGT TAAAACCCCC GCCGACCTGA AAGGGCTGAA AATCCGCACC AACAATAGCC CGATGAATAT CGCCGCATTC AAAGTCTTTG GCGCTAACCC GATCCCGATG CCGTTTGCCG AAGTCTATAC CGGGCTGGAA ACCCGCACTA TCGACGCTCA GGAACACCCG ATCAACGTCG TCTGGTCAGC AAAATTTTTC GAAGTGCAGA AGTTCCTTTC TCTGACGCAC CACGCCTATT CCCCGCTTCT GGTGGTGATC AACAAAGCGA AGTTTGATGG CTTAAGTCCG GAGTTCCAGC AGGCGCTAGT TTCATCTGCA CAAGAAGCGG GTAACTATCA GCGCAAACTG GTTGCTGAAG ATCAGCAAAA AATCATCGAC GGCATGAAAG AAGCGGGCGT GGAAGTCATC ACCGATCTCG ACCGCAAAGC CTTTAGCGAC GCACTGGGGA ATCAGGTTCG CGACATGTTT GTTAAAGATG TGCCGCAGGG AGCTGATCTG CTGAAAGCCG TGGATGAGGT GCAATAA
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Protein sequence | MKLRSVTYAL FIAGLAAFST SSLAAQSLRF GYETSQTDSQ HIAAKKFNDL LQERTKGELK LKLFPDSTLG NAQAMISGVR GGTIDMEMSG SNNFAGLSPV MNLLDVPFLF RDTAHAHKTL DGKVGDDLKA SLEGKGLKVL AYWENGWRDV TNSRAPVKTP ADLKGLKIRT NNSPMNIAAF KVFGANPIPM PFAEVYTGLE TRTIDAQEHP INVVWSAKFF EVQKFLSLTH HAYSPLLVVI NKAKFDGLSP EFQQALVSSA QEAGNYQRKL VAEDQQKIID GMKEAGVEVI TDLDRKAFSD ALGNQVRDMF VKDVPQGADL LKAVDEVQ
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