| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0104 |
|---|
| Symbol | |
|---|
| ID | 6065420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 108705 |
|---|
| End bp | 109481 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641599508 |
|---|
| Product | DNA-binding transcriptional repressor LldR |
|---|
| Protein accession | YP_001723117 |
|---|
| Protein GI | 170018163 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTTT TACCCAGACG CCTGTCAGAC GAGGTTGCCG ATCGTGTGCG GGCGCTGATT
GATGAAAAAA ACCTGGAAGC GGGCATGAAG TTGCCCGCTG AGCGCCAACT GGCGATGCAA
CTCGGCGTAT CACGTAATTC ACTGCGCGAG GCGCTGGCAA AACTGGTGAG TGAAGGCGTG
CTGCTCAGTC GACGCGGCGG CGGGACGTTT ATTCGCTGGC GTCATGACAC ATGGTCGGAG
CAAAACATCG TCCAGCCGCT AAAAACACTG ATGGCCGATG ATCCGGATTA CAGTTTCGAT
ATTCTGGAAG CCCGCTACGC CATTGAAGCC AGCACCGCAT GGCATGCGGC AATGCGCGCC
ACACCTGGCG ACAAAGAAAA GATTCAGCTT TGCTTTGAAG CAACGCTAAG TGAAGACCCG
GATATCGCCT CACAAGCGGA CGTTCGTTTT CATCTGGCGA TTGCCGAAGC CTCACATAAC
ATCGTGCTGC TGCAAACCAT GCGCGGTTTC TTCGATGTCC TGCAATCCTC AGTGAAGCAT
AGCCGTCAGC GGATGTATCT GGTGCCACCG GTTTTTTCAC AACTGACCGA ACAACATCAG
GCTGTCATTG ACGCCATTTT TGCCGGTGAT GCTGACGGGG CGCGTAAAGC AATGATGGCG
CACCTTAGTT TTGTTCACAC CACCATGAAA CGATTCGATG AAGATCAGGC TCGCCACGCA
CGGATTACCC GCCTGCCCGG TGAGCATAAT GAGCATTCGA GGGAGAAAAA CGCATGA
|
|---|
| Protein sequence | MIVLPRRLSD EVADRVRALI DEKNLEAGMK LPAERQLAMQ LGVSRNSLRE ALAKLVSEGV
LLSRRGGGTF IRWRHDTWSE QNIVQPLKTL MADDPDYSFD ILEARYAIEA STAWHAAMRA
TPGDKEKIQL CFEATLSEDP DIASQADVRF HLAIAEASHN IVLLQTMRGF FDVLQSSVKH
SRQRMYLVPP VFSQLTEQHQ AVIDAIFAGD ADGARKAMMA HLSFVHTTMK RFDEDQARHA
RITRLPGEHN EHSREKNA
|
|---|
| |