Gene EcolC_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0099 
Symbol 
ID6068651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp104451 
End bp104918 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content51% 
IMG OID641599503 
Productpreprotein translocase subunit SecB 
Protein accessionYP_001723112 
Protein GI170018158 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAAC AAAACAACAC CGAAATGACT TTCCAGATCC AACGTATTTA TACCAAGGAT 
ATTTCTTTCG AAGCGCCGAA CGCGCCGCAC GTTTTCCAGA AAGATTGGCA GCCAGAAGTT
AAACTTGATC TGGATACGGC ATCTACTCAA CTGGCAGATG ACGTTTACGA AGTGGTACTG
CGTGTTACCG TAACGGCCTC CCTGGGCGAA GAAACCGCGT TCCTGTGTGA AGTTCAGCAG
GGCGGTATTT TCTCCATCGC GGGTATCGAA GGCACCCAGA TGGCACATTG CCTGGGCGCA
TACTGCCCGA ACATTCTGTT CCCGTATGCT CGTGAGTGCA TCACCAGCAT GGTATCCCGC
GGTACATTCC CGCAACTGAA CCTTGCGCCG GTTAACTTCG ATGCGCTGTT CATGAACTAT
TTGCAGCAGC AGGCTGGCGA AGGTACTGAA GAACATCAGG ATGCCTGA
 
Protein sequence
MSEQNNTEMT FQIQRIYTKD ISFEAPNAPH VFQKDWQPEV KLDLDTASTQ LADDVYEVVL 
RVTVTASLGE ETAFLCEVQQ GGIFSIAGIE GTQMAHCLGA YCPNILFPYA RECITSMVSR
GTFPQLNLAP VNFDALFMNY LQQQAGEGTE EHQDA