| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0092 |
|---|
| Symbol | tdh |
|---|
| ID | 6068362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 97234 |
|---|
| End bp | 98259 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641599496 |
|---|
| Product | L-threonine 3-dehydrogenase |
|---|
| Protein accession | YP_001723105 |
|---|
| Protein GI | 170018151 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.212636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.425053 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGT TATCCAAACT GAAAGCGGAA GAGGGCATCT GGATGACCGA CGTTCCTGTA
CCGGAACTCG GGCATAACGA TCTGCTGATT AAAATCCGTA AAACAGCCAT CTGCGGGACT
GACGTTCACA TCTATAACTG GGATGAGTGG TCGCAAAAAA CCATCCCGGT GCCGATGGTC
GTGGGCCATG AATATGTCGG TGAAGTGGTA GGTATTGGTC AGGAAGTGAA GGGCTTCAAG
ATTGGCGATC GCGTTTCTGG CGAAGGCCAT ATCACCTGCG GTCACTGTCG CAACTGTCGT
GGCGGTCGTA CCCATCTGTG CCGCAACACG ATCGGCGTCG GCGTTAACCG CCCGGGCTGC
TTCGCCGAAT ATCTGGTGAT TCCGGCGTTC AACGCCTTCA AAATTCCCGA CAATATCTCC
GACGACCTGG CTTCCATTTT TGATCCCTTC GGTAATGCCG TGCATACCGC GCTGTCGTTC
GATCTGGTTG GCGAGGATGT GCTGGTTTCT GGTGCAGGCC CGATTGGTAT TATGGCAGCG
GCGGTGGCGA AACACGTTGG TGCACGCAAT GTGGTGATCA CTGATGTTAA CGAATACCGC
CTTGAGCTGG CGCGTAAAAT GGGTATCACC CGTGCGGTTA ACGTCGCCAA AGAAAATCTC
AATGACGTGA TGGCGGAGTT AGGCATGACC GAAGGTTTTG ATGTCGGTCT GGAAATGTCC
GGTGCGCCGC CAGCGTTTCG TACCATGCTT GACACCATGA ACCACGGCGG CCGTATTGCG
ATGCTGGGTA TTCCGCCGTC TGATATGTCT ATCGACTGGA CCAAAGTGAT CTTTAAAGGC
TTGTTCATTA AAGGTATTTA CGGTCGTGAG ATGTTTGAAA CCTGGTACAA GATGGCGGCG
CTGATTCAGT CTGGCCTCGA TCTTTCGCCG ATCATTACCC ATCGTTTCTC TATCGATGAT
TTCCAGAAGG GCTTTGACGC TATGCGTTCG GGCCAGTCCG GGAAAGTTAT TCTGAGCTGG
GATTAA
|
|---|
| Protein sequence | MKALSKLKAE EGIWMTDVPV PELGHNDLLI KIRKTAICGT DVHIYNWDEW SQKTIPVPMV
VGHEYVGEVV GIGQEVKGFK IGDRVSGEGH ITCGHCRNCR GGRTHLCRNT IGVGVNRPGC
FAEYLVIPAF NAFKIPDNIS DDLASIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGIMAA
AVAKHVGARN VVITDVNEYR LELARKMGIT RAVNVAKENL NDVMAELGMT EGFDVGLEMS
GAPPAFRTML DTMNHGGRIA MLGIPPSDMS IDWTKVIFKG LFIKGIYGRE MFETWYKMAA
LIQSGLDLSP IITHRFSIDD FQKGFDAMRS GQSGKVILSW D
|
|---|
| |