Gene EcolC_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0076 
Symbol 
ID6068403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp80623 
End bp81432 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID641599480 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_001723089 
Protein GI170018135 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.49285e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.61628e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTGAAT TACCCGAAGT TGAAACCAGC CGTCGCGGCA TAGAACCGCA TCTCGTTGGT 
GCAACCATTC TTCATGCAGT GGTGCGCAAC GGACGCTTGC GCTGGCCGGT TTCAGAAGAG
ATCTACCGTT TAAGCGACCA ACCAGTGCTT AGCGTGCAGC GGCGGGCTAA ATATTTGCTG
CTGGAGCTGC CTGAGGGCTG GATTATCATT CATTTGGGGA TGTCTGGCAG CCTGCGCATC
CTTCCAGAAG AACTTCCCCC TGAAAAGCAT GACCACGTGG ATTTGGTGAT GAGCAACGGT
AAAGTGCTGC GCTACACCGA TCCGCGCCGC TTTGGTGCCT GGCTGTGGAC CAAAGAGCTG
GAAGGGCATA ATGTGCTGGC CCATCTTGGA CCGGAGCCGC TCAGCGACGA TTTCAATGGT
GAGTATCTGC ATCAGAAGTG CGCGAAGAAA AAAACGGCGA TTAAACCGTG GCTGATGGAT
AACAAGCTGG TGGTAGGGGT AGGGAATATC TATGCCAGCG AATCACTGTT TGCGGCGGGG
ATCCATCCGG ATCGGCTGGC GTCATCACTG TCGCTGGCAG AGTGTGAATT GTTAGCTCGG
GTGATTAAAG CGGTGTTGCT GCGTTCGATT GAGCAGGGCG GTACAACGCT GAAAGATTTT
CTGCAAAGTG ATGGTAAACC GGGCTATTTC GCACAGGAAT TGCAGGTTTA CGGGCGAAAA
GGCGAGCCGT GTCGGGTGTG CGGTACGCCG ATTGTGGCGA CTAAACATGC GCAGCGGGCA
ACGTTTTATT GTCGGCAGTG CCAGAAGTAA
 
Protein sequence
MPELPEVETS RRGIEPHLVG ATILHAVVRN GRLRWPVSEE IYRLSDQPVL SVQRRAKYLL 
LELPEGWIII HLGMSGSLRI LPEELPPEKH DHVDLVMSNG KVLRYTDPRR FGAWLWTKEL
EGHNVLAHLG PEPLSDDFNG EYLHQKCAKK KTAIKPWLMD NKLVVGVGNI YASESLFAAG
IHPDRLASSL SLAECELLAR VIKAVLLRSI EQGGTTLKDF LQSDGKPGYF AQELQVYGRK
GEPCRVCGTP IVATKHAQRA TFYCRQCQK