Gene EcolC_0074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0074 
SymbolrpmB 
ID6068399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp80101 
End bp80337 
Gene Length237 bp 
Protein Length78 aa 
Translation table11 
GC content53% 
IMG OID641599478 
Product50S ribosomal protein L28 
Protein accessionYP_001723087 
Protein GI170018133 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.90162e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.34659e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCCGAG TCTGCCAAGT TACTGGCAAG CGTCCGGTGA CCGGTAACAA CCGTTCCCAC 
GCACTGAACG CGACTAAACG CCGTTTCCTG CCGAACCTGC ACTCTCACCG TTTCTGGGTT
GAGAGCGAGA AGCGTTTTGT CACCCTGCGC GTATCTGCTA AAGGTATGCG TGTAATCGAT
AAAAAAGGCA TCGATACAGT TCTGGCTGAA CTGCGTGCCC GTGGCGAAAA GTACTAA
 
Protein sequence
MSRVCQVTGK RPVTGNNRSH ALNATKRRFL PNLHSHRFWV ESEKRFVTLR VSAKGMRVID 
KKGIDTVLAE LRARGEKY