Gene EcolC_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0070 
SymbolslmA 
ID6068408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp76685 
End bp77281 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID641599474 
Productnucleoid occlusion protein 
Protein accessionYP_001723083 
Protein GI170018129 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.94925e-05 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.43905e-09 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCAGAAA AACAAACTGC GAAAAGGAAC CGTCGCGAGG AAATACTTCA GTCTCTGGCG 
CTGATGCTGG AATCCAGCGA TGGAAGCCAA CGTATCACGA CGGCAAAACT GGCCGCCTCT
GTCGGCGTTT CCGAAGCGGC ACTGTATCGC CACTTCCCCA GTAAGACCCG CATGTTCGAT
AGCCTGATTG AGTTTATCGA AGATAGCCTG ATTACTCGCA TCAACCTGAT TCTGAAAGAT
GAGAAAGACA CCACAGCGCG CCTGCGTCTG ATTGTGTTGC TGCTTCTCGG TTTTGGTGAG
CGTAATCCTG GCCTGACCCG CATCCTCACT GGTCATGCGC TGATGTTTGA ACAGGATCGC
CTGCAAGGGC GTATCAACCA GCTGTTCGAG CGTATTGAAG CGCAGCTGCG TCAGGTATTG
CGTGAAAAGA GAATGCGTGA GGGTGAAGGT TACACCACCG ATGAAACCCT GCTGGCAAGC
CAGATCCTGG CCTTCTGTGA AGGTATGCTG TCACGTTTTG TCCGCAGCGA ATTTAAATAC
CGCCCGACGG ATGATTTTGA CGCCCGCTGG CCGCTAATTG CCGCGCAGTT GCAGTAA
 
Protein sequence
MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL ITRINLILKD EKDTTARLRL IVLLLLGFGE RNPGLTRILT GHALMFEQDR
LQGRINQLFE RIEAQLRQVL REKRMREGEG YTTDETLLAS QILAFCEGML SRFVRSEFKY
RPTDDFDARW PLIAAQLQ