Gene EcolC_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0069 
SymbolpyrE 
ID6068388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp76007 
End bp76648 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID641599473 
Productorotate phosphoribosyltransferase 
Protein accessionYP_001723082 
Protein GI170018128 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0461] Orotate phosphoribosyltransferase 
TIGRFAM ID[TIGR00336] orotate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000170079 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000943905 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAAACCAT ATCAGCGCCA GTTTATTGAA TTTGCGCTTA GCAAGCAGGT GTTAAAGTTT 
GGCGAGTTTA CGCTGAAATC CGGGCGCAAA AGCCCCTATT TCTTCAACGC CGGGCTGTTT
AATACCGGGC GCGACCTGGC ACTGTTAGGC CGTTTTTACG CTGAAGCATT GGTGGATTCT
GGCATTGAGT TCGATCTGCT GTTTGGCCCT GCTTACAAAG GGATCCCGAT TGCGACCACT
ACCGCCGTGG CGCTGGCGGA GCATCATGAC CTTGACCTGC CGTACTGCTT TAACCGCAAA
GAGGCAAAAG ACCACGGTGA AGGCGGCAAT CTGGTTGGTA GCGCGTTACA AGGACGCGTA
ATGCTGGTAG ATGATGTGAT CACCGCCGGA ACGGCGATTC GCGAATCGAT GGAGATTATT
CAGGCTAATG GCGCGACGCT TGCTGGCGTA TTGATTTCGC TTGATCGTCA GGAACGGGGG
CGCGGCGAGA TTTCGGCGAT TCAGGAAGTT GAGCGTGATT ACAACTGCAA AGTGATCTCT
ATCATCACCC TGAAAGATCT GATTGCCTAT CTGGAAGAGA AGCCGGAAAT GGCGGAACAT
CTGGCGGCGG TTAAGGCCTA TCGCGAAGAG TTTGGCGTTT AA
 
Protein sequence
MKPYQRQFIE FALSKQVLKF GEFTLKSGRK SPYFFNAGLF NTGRDLALLG RFYAEALVDS 
GIEFDLLFGP AYKGIPIATT TAVALAEHHD LDLPYCFNRK EAKDHGEGGN LVGSALQGRV
MLVDDVITAG TAIRESMEII QANGATLAGV LISLDRQERG RGEISAIQEV ERDYNCKVIS
IITLKDLIAY LEEKPEMAEH LAAVKAYREE FGV