Gene EcolC_0068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0068 
Symbolrph 
ID6068420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp75225 
End bp75941 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content57% 
IMG OID641599472 
Productribonuclease PH 
Protein accessionYP_001723081 
Protein GI170018127 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0689] RNase PH 
TIGRFAM ID[TIGR01966] ribonuclease PH 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000387167 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value1.82868e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGTCCAG CAGGCCGTAG CAATAATCAG GTGCGTCCCG TTACCCTGAC TCGTAACTAT 
ACAAAACATG CAGAAGGCTC GGTGCTGGTC GAATTTGGCG ATACCAAAGT GTTGTGTACC
GCCTCTATTG AAGAAGGCGT GCCGCGCTTC CTGAAAGGTC AGGGCCAGGG CTGGATCACC
GCAGAGTACG GCATGCTGCC ACGTTCTACC CACACCCGTA ACGCTCGTGA AGCGGCGAAA
GGTAAGCAGG GTGGACGCAC AATGGAAATC CAGCGTCTGA TCGCCCGTGC TCTTCGCGCG
GCAGTAGATT TGAAAGCGCT GGGTGAGTTC ACCATTACGC TGGACTGCGA CGTGCTTCAG
GCTGATGGTG GCACGCGTAC CGCGTCGATT ACGGGTGCCT GCGTGGCGCT GGCAGATGCG
CTACAGAAGC TGGTGGAAAA CGGCAAGCTG AAAACCAACC CGATGAAAGG GATGGTAGCC
GCAGTTTCTG TCGGTATTGT AAACGGTGAA GCAATTTGCG ATCTGGAATA CGTTGAAGAC
TCAGCCGCAG AGACCGACAT GAACGTAGTG ATGACCGAAG ACGGGCGCAT CATTGAAGTG
CAGGGGACGG CAGAAGGCGA GCCGTTCACC CATGAAGAGC TACTCACCTT GTTGGCGCTG
GCCCGAGGGG GAATCGAATC CATTGTAGCG ACGCAGAAGG CGGCGCTGGC AAACTGA
 
Protein sequence
MRPAGRSNNQ VRPVTLTRNY TKHAEGSVLV EFGDTKVLCT ASIEEGVPRF LKGQGQGWIT 
AEYGMLPRST HTRNAREAAK GKQGGRTMEI QRLIARALRA AVDLKALGEF TITLDCDVLQ
ADGGTRTASI TGACVALADA LQKLVENGKL KTNPMKGMVA AVSVGIVNGE AICDLEYVED
SAAETDMNVV MTEDGRIIEV QGTAEGEPFT HEELLTLLAL ARGGIESIVA TQKAALAN