Gene EcolC_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0060 
Symbol 
ID6068411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp66569 
End bp67258 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content55% 
IMG OID641599464 
ProducttRNA guanosine-2'-O-methyltransferase 
Protein accessionYP_001723073 
Protein GI170018119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000232977 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCCAA CACGTTATGC ACGCATCTGC GAAATGCTCG CCAGGCGGCA GCCTGATCTG 
ACCGTCTGCA TGGAGCAGGT CCACAAACCT CATAACGTTT CTGCGATTAT TCGTACCGCA
GATGCCGTTG GCGTACATGA AGTTCACGCC GTCTGGCCTG GTAGCCGCAT GCGCACCATG
GCTTCGGCAG CGGCGGGTAG TAACAGCTGG GTACAGGTGA AAACACACCG CACCATTGGC
GATGCCGTCG CTCATCTCAA AGGCCAGGGC ATGCAGATTC TGGCAACCCA TCTTTCTGAT
AACGCTGTCG ATTTCCGCGA AATTGATTAC ACTCGCCCGA CCTGCATTTT GATGGGACAG
GAGAAAACGG GCATCACGCA GGAAGCATTG GCCCTGGCGG ATCAGGACAT CATCATTCCG
ATGATCGGCA TGGTGCAGTC GCTGAATGTT TCCGTTGCCT CAGCCCTCAT TCTTTACGAA
GCCCAGCGTC AGCGGCAAAA TGCAGGCATG TACCTGCGTG AAAACAGCAT GTTGCCGGAA
GCAGAGCAAC AACGCCTGTT GTTTGAAGGC GGCTATCCGG TGCTGGCGAA AGTCGCAAAA
CGCAAAGGCC TGCCTTATCC CCACGTCAAT CAGCAAGGCG AGATCGAAGC TGATGCCGAC
TGGTGGGCTA CTATGCAGGC TGCAGGGTAA
 
Protein sequence
MNPTRYARIC EMLARRQPDL TVCMEQVHKP HNVSAIIRTA DAVGVHEVHA VWPGSRMRTM 
ASAAAGSNSW VQVKTHRTIG DAVAHLKGQG MQILATHLSD NAVDFREIDY TRPTCILMGQ
EKTGITQEAL ALADQDIIIP MIGMVQSLNV SVASALILYE AQRQRQNAGM YLRENSMLPE
AEQQRLLFEG GYPVLAKVAK RKGLPYPHVN QQGEIEADAD WWATMQAAG