| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_0011 |
|---|
| Symbol | |
|---|
| ID | 6068511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | + |
|---|
| Start bp | 10779 |
|---|
| End bp | 11927 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641599416 |
|---|
| Product | galactonate dehydratase |
|---|
| Protein accession | YP_001723026 |
|---|
| Protein GI | 170018072 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT
GAAACCGATG AAGGCGTGGT CGGTTGGGGC GAGCCCGTGA TCGAAGGCCG CGCCCGTACG
GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC
AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTCTATC GCGGCGGTCC GATCCTGATG
AGCGCCATCG CCGGGATTGA CCAGGCGTTA TGGGATATCA AAGGTAAAGT GCTGAATGCG
CCGGTCTGGC AACTGATGGG CGGCCTGGTT CGCGACAAAA TTAAAGCCTA CAGTTGGGTT
GGCGGCGATC GTCCGGCGGA TGTTATCGAC GGCATTAAAA CGCTACGCGA AATCGGCTTC
GATACCTTCA AACTGAACGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA
GATGCGGCGG TTAACACCGT GGCACAAATT CGTGAAGCTT TTGGCAATCA GATTGAGTTT
GGTCTTGATT TCCACGGTCG CGTCAGCGCG CCGATGGCGA AAGTGCTGAT TAAAGAACTG
GAGCCGTATC GCCCGCTGTT TATTGAGGAG CCGGTGCTGG CGGAACAAGC CGAATACTAC
CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGC
TTCGATTTTA AACGCGTGCT GGAGGCAGGC GGTATTTCGA TTCTGCAACC GGATCTCTCC
CACGCGGGCG GTATTACCGA ATGCTACAAA ATCGCCGGAA TGGCAGAAGC CTATGACGTG
ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CGGCTTGCCT GCATATCGAC
TTTGTTTCCT ATAACGCCGT ACTTCAGGAA CAAAGTATGG GAATTCATTA CAACAAAGGC
GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAAGACTTCA GCATGGTCGG CGGCTTCTTT
AAACCGTTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT GATTGAGTTC
AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA
GAGTGGTAA
|
|---|
| Protein sequence | MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI
NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNA PVWQLMGGLV RDKIKAYSWV
GGDRPADVID GIKTLREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF
GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR
FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID
FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF
SKNAPDWRNP LWRHEDNSVA EW
|
|---|
| |