Gene EcolC_0011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_0011 
Symbol 
ID6068511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp10779 
End bp11927 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content53% 
IMG OID641599416 
Productgalactonate dehydratase 
Protein accessionYP_001723026 
Protein GI170018072 
COG category[R] General function prediction only
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCAAAATTAC CACGTATCGT TTACCTCCCC GCTGGATGTT CCTGAAAATT 
GAAACCGATG AAGGCGTGGT CGGTTGGGGC GAGCCCGTGA TCGAAGGCCG CGCCCGTACG
GTGGAAGCGG CAGTTCACGA GCTGGGTGAC TATTTGATTG GTCAGGATCC ATCGCGCATC
AATGACTTAT GGCAAGTGAT GTATCGCGCC GGATTCTATC GCGGCGGTCC GATCCTGATG
AGCGCCATCG CCGGGATTGA CCAGGCGTTA TGGGATATCA AAGGTAAAGT GCTGAATGCG
CCGGTCTGGC AACTGATGGG CGGCCTGGTT CGCGACAAAA TTAAAGCCTA CAGTTGGGTT
GGCGGCGATC GTCCGGCGGA TGTTATCGAC GGCATTAAAA CGCTACGCGA AATCGGCTTC
GATACCTTCA AACTGAACGG TTGTGAAGAA CTGGGGCTAA TTGATAACTC CCGCGCGGTA
GATGCGGCGG TTAACACCGT GGCACAAATT CGTGAAGCTT TTGGCAATCA GATTGAGTTT
GGTCTTGATT TCCACGGTCG CGTCAGCGCG CCGATGGCGA AAGTGCTGAT TAAAGAACTG
GAGCCGTATC GCCCGCTGTT TATTGAGGAG CCGGTGCTGG CGGAACAAGC CGAATACTAC
CCGAAACTGG CGGCACAAAC GCATATTCCA CTGGCGGCGG GTGAGCGCAT GTTCTCACGC
TTCGATTTTA AACGCGTGCT GGAGGCAGGC GGTATTTCGA TTCTGCAACC GGATCTCTCC
CACGCGGGCG GTATTACCGA ATGCTACAAA ATCGCCGGAA TGGCAGAAGC CTATGACGTG
ACCCTTGCGC CGCACTGTCC GCTCGGACCG ATTGCACTGG CGGCTTGCCT GCATATCGAC
TTTGTTTCCT ATAACGCCGT ACTTCAGGAA CAAAGTATGG GAATTCATTA CAACAAAGGC
GCGGAGTTAC TCGACTTTGT GAAAAACAAA GAAGACTTCA GCATGGTCGG CGGCTTCTTT
AAACCGTTAA CGAAACCGGG CTTAGGCGTG GAAATCGACG AAGCTAAAGT GATTGAGTTC
AGTAAAAATG CCCCGGACTG GCGTAATCCG CTCTGGCGTC ATGAAGATAA CAGCGTAGCA
GAGTGGTAA
 
Protein sequence
MKITKITTYR LPPRWMFLKI ETDEGVVGWG EPVIEGRART VEAAVHELGD YLIGQDPSRI 
NDLWQVMYRA GFYRGGPILM SAIAGIDQAL WDIKGKVLNA PVWQLMGGLV RDKIKAYSWV
GGDRPADVID GIKTLREIGF DTFKLNGCEE LGLIDNSRAV DAAVNTVAQI REAFGNQIEF
GLDFHGRVSA PMAKVLIKEL EPYRPLFIEE PVLAEQAEYY PKLAAQTHIP LAAGERMFSR
FDFKRVLEAG GISILQPDLS HAGGITECYK IAGMAEAYDV TLAPHCPLGP IALAACLHID
FVSYNAVLQE QSMGIHYNKG AELLDFVKNK EDFSMVGGFF KPLTKPGLGV EIDEAKVIEF
SKNAPDWRNP LWRHEDNSVA EW